Sphingomonas donggukensis: M9980_05295
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Entry
M9980_05295 CDS
T08944
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
sdon
Sphingomonas donggukensis
Pathway
sdon00220
Arginine biosynthesis
sdon00240
Pyrimidine metabolism
sdon00250
Alanine, aspartate and glutamate metabolism
sdon01100
Metabolic pathways
sdon01110
Biosynthesis of secondary metabolites
sdon01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
M9980_05295 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
M9980_05295 (carB)
00220 Arginine biosynthesis
M9980_05295 (carB)
Enzymes [BR:
sdon01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
M9980_05295 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
CoA_binding_2
MucBP_2
Motif
Other DBs
NCBI-ProteinID:
URW76627
LinkDB
All DBs
Position
complement(1084064..1087396)
Genome browser
AA seq
1110 aa
AA seq
DB search
MPKRTDISSILVIGAGPIVIGQACEFDYSGTQAIKALKEDGYRIVLVNSNPATIMTDPEL
ADATYIEPITPEIVAKIIAKERPDAVLPTMGGQTALNTALALFNDGTLAKYGVEMIGADA
EAIDKAEDRLKFKDAMSKIGLESARSAIAHTEAEALEGLAKTGLPAIIRPSFTMGGTGGG
IAYNREEFIEIVRKGLDASPTTEVLIEESLIGWKEYEMEVVRDRADNAIIVCSIENIDPM
GVHTGDSITVAPALTLTDKEYQIMRNASIACLREIGVETGGSNVQFAVNPKDGRLIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDEITNDITGATPASFEPTIDYVVTKIPR
FAFEKFKGAEAVLGTAMKSVGEVMAIGRNIHESLQKALRGLETGLSGFNTVDRLAGRPRA
EIEAALAVATPDRLLVAAQALREGFTVADVHAIAKFDPWFLGRIAEIVAAEMEVCKDGLP
IDAAGMRRLKSMGFSDKRLAWLALQSANLRGMSRGIARGSGLIHEAVKAMTGGVTEDEVR
EHRLKLGVRPVFKRIDTCAAEFDARTPYMYSTYEAPSFGEPECESAPSDRKKIVILGGGP
NRIGQGIEFDYCCCHACFALADAGYETIMVNCNPETVSTDYDTSDRLYFEPLTAEDVLEI
LHVEQQNGTLVGVIVQFGGQTPLNLAQALEDAGIPILGTSPDAIDLAEDRERFAALVAKL
GLTQPANGIARSRDEAIAVAERIGYPVLMRPSYVLGGRAMEVVDGPAQLDDYIATAVQVS
GTSPVLIDSYLRDAIEVDVDAICDGTDVTVAGVMQHIEEAGVHSGDSACSLPPYSLSAGI
IAEIERQTEALARALSVVGLMNIQFAVKDGVVYLIEVNPRASRTVPFVAKAVGSPVAKIA
ARVMAGEKLAELPQVNRAVGHVAVKEAVFPFNRFPGVDPVLSPEMKSTGEVMGIDRDFTL
AFAKAQLGAGTTLPAGGTVFISVKDTDKPVILAGARVMAAQGFAIVATNGTADYLTANGV
AVETVLKVAQGRPNIVDRIRDGDIALVFNTTEGWQSLKDSQEIRKSALAQKIPYFTTASA
AVAAANSIAALATTSLEVRPLQSYYSQSHK
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacgtaccgatatctcctccattcttgtcatcggcgcggggccgatcgttatc
gggcaggcgtgcgagttcgattattcgggcacgcaggcgatcaaggcgttgaaggaggac
gggtaccgcatcgtcctggtcaattcgaacccggcgacgatcatgaccgatccggaactg
gccgacgcgacctatatcgagccgatcacgcccgagatcgtcgccaagatcatcgccaag
gagcgccccgacgccgtcctgccgacgatgggcgggcagactgcgctcaacaccgcgttg
gcgctgttcaacgacggcacgctcgcgaaatacggcgtcgagatgatcggcgcggatgcc
gaggcgatcgacaaggccgaggaccggctgaagttcaaggacgcgatgtcgaagataggg
ctggaatcggcgcgctcggcgatcgcgcataccgaggccgaggcgctggaggggctggcc
aagaccggcctcccggcgatcatccgcccgagttttacgatgggcgggacgggcgggggc
atcgcctacaaccgcgaggaattcatcgagatcgtccgcaaggggctcgacgcatcgccg
accaccgaagtgctgatcgaggaatcgctgatagggtggaaggagtatgagatggaagtc
gtgcgcgaccgcgccgacaacgccatcatcgtctgctcgatcgagaatatcgacccgatg
ggcgtccacaccggcgattccatcacggtcgcgccggcgctgacgctgaccgacaaggaa
tatcagatcatgcgcaacgcaagcatcgcttgcctgcgcgaaatcggtgtcgaaacaggc
ggttccaacgtccagttcgcggtgaatccgaaggacgggcgcctgatcgtcattgaaatg
aacccgcgcgtcagccgctcgtcggcattggcgtcgaaggcgaccggctttccgatcgcg
aaggtcgcggcgaagctggcggtgggctacacgctcgacgagatcaccaacgacatcacg
ggcgcgacgccggccagtttcgagccgacgatcgattacgtcgtcaccaagataccccgg
ttcgccttcgagaagttcaagggcgcggaagccgtgctcggcaccgcgatgaagtcggtc
ggcgaagtcatggcgatcgggcgcaacatacacgaaagcctgcagaaggcattgcgtggg
ctcgaaaccgggctcagcgggttcaacaccgtcgacaggctggccgggcgtccccgcgcg
gaaatcgaggcggcgctggcggtggcgacgccggaccggctgctggtggcggcgcaggcg
ctgcgcgagggcttcacggtggccgacgtccacgcgatcgcgaagttcgacccctggttc
ctggggcggatcgccgagatcgtcgcggcggagatggaggtctgcaaggacgggctgccg
atcgacgcggcgggcatgcgccggctgaaatcgatggggttcagcgacaagcggctggcg
tggctggcgctgcaatcggctaacctgcgcgggatgagccgcggcatcgcgcgcggctcc
ggcctgatccacgaagcggtcaaggcgatgaccggcggagtcaccgaggacgaggtgcgc
gaacaccggctgaagctgggcgtgcgcccggtgttcaagcggatcgacacctgtgctgcg
gagttcgatgcccggacgccgtatatgtactcgacctacgaagcgccgagcttcggagag
ccggagtgcgaaagcgcgcctagcgaccggaaaaagatcgttattctgggcggcgggccg
aaccggatcgggcaggggatcgagttcgattactgctgctgccacgcctgctttgcgctg
gcggatgcgggctatgagacgatcatggtcaactgcaatccggagacggtgagcaccgat
tacgacacgtccgaccgcctgtatttcgagccgctgactgccgaggacgtgctggaaatc
ctgcatgtcgagcagcagaatggcacgctggtcggcgtgatcgtccagttcggcgggcag
accccgctcaatctggcgcaggcgttggaggatgcgggcattccgattctggggacttcg
cctgacgcgatcgacctggccgaggaccgcgagcggttcgcggcgctcgtcgccaagctg
gggctgacccagcccgccaacggcatcgcgcgtagccgcgacgaggcgatcgcggtggcc
gagcgcatcggctatccggtgctgatgcgcccgagctatgtgcttgggggccgggcgatg
gaggtcgtcgatggtccggcgcagctcgacgactatatcgcgaccgcggtgcaggtgtcg
ggcacatcgccggtgctgatcgacagttatctgcgcgacgcgatcgaggtcgatgtcgac
gcgatctgcgacggcaccgacgtcacggtcgcgggcgtgatgcagcacatcgaggaagcc
ggcgttcattcgggcgattcggcctgctcgctgccgccgtacagcctgtccgcaggaatc
atcgccgagatcgaacgccagaccgaggcactggcgcgcgcgctgtcggtcgtcgggctg
atgaacatccagttcgcggtgaaggacggtgtcgtctacctgatcgaggtcaacccgcgc
gccagccggacggtgccgttcgttgccaaggcggtgggatcgcccgtcgccaagatcgcg
gcgcgggtgatggcgggcgagaagctggccgagctgccgcaggtcaatcgcgccgtgggc
cacgtcgcggtgaaggaagcggtgttcccgttcaatcgcttcccgggcgttgatcctgtg
ctgtcaccggaaatgaagtccaccggcgaagtcatgggaatagatcgcgatttcacgctg
gccttcgccaaggcgcagctgggcgcggggacgacgctgccggcgggcggcaccgtcttc
atcagcgtcaaggacaccgacaagccggtgatcctggccggcgcccgcgtgatggcggcg
cagggattcgccatcgtcgccaccaacggcaccgccgattatctgaccgccaacggcgtc
gcggtggaaacggtgctgaaggtggcacagggccgcccgaacatcgtcgatcgtatccgc
gacggcgacatcgcgctggtgttcaatacgaccgagggctggcagtcgctgaaggacagc
caggagatccgcaaatcggcgctggcgcagaagatcccgtatttcacgaccgcatcggcg
gcggtggcggcggcgaactcgatcgcggcgctcgccaccacctctcttgaagtacgcccg
ctgcaatcctattattcgcagtcgcacaaataa
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