Sphingomonas donggukensis: M9980_05865
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Entry
M9980_05865 CDS
T08944
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
sdon
Sphingomonas donggukensis
Pathway
sdon02024
Quorum sensing
sdon03060
Protein export
sdon03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
M9980_05865 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
M9980_05865 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
M9980_05865 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sdon02044
]
M9980_05865 (ffh)
Enzymes [BR:
sdon01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
M9980_05865 (ffh)
Secretion system [BR:
sdon02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
M9980_05865 (ffh)
Eukaryotic Sec-SRP protein
M9980_05865 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
AAA_16
TctA
ABC_tran
AAA_5
AAA_19
AAA_31
AAA_33
AAA_24
AAA_18
AAA
AAA_14
YqeC
AAA_28
AAA_25
Thymidylate_kin
APS_kinase
cobW
nSTAND3
AAA_17
NACHT
6PF2K
ResIII
KTI12
Motif
Other DBs
NCBI-ProteinID:
URW76729
UniProt:
A0ABY4U031
LinkDB
All DBs
Position
complement(1209154..1210641)
Genome browser
AA seq
495 aa
AA seq
DB search
MFDSLSDRLGGVFDRLRGRGALTEADVRSAMREVRVALLEADVALPVARKFVDDVTEKAV
GHNVLRSITPGQQVVKIVNDALVEMLGSENTGLDLDVTPPAVVMLVGLQGSGKTTTTAKL
AKLLSGRERKKVMMASLDVNRPAAQEQLAVLGTQVEVATLPIVAGQQPVDIARRALQAAK
LQGYDVLMLDTAGRLHVDQALMDEMKAVADIATPNEILLVVDSLTGQDAVNVAQNFSDQV
PLTGVILTRMDGDARGGAALSMRAVTGKPIKFAGVGEKLDAIEPFHPGRVAGRILGMGDV
VSLVEKAAQSIQAEDAERMAARIEKGKFDLNDLRSQLAQMRRMGGLGALAGMIPGMKKAQ
AAMASGAVDEKILLRMDAMIGSMTVKERAKPEIISAKRKIRVAKGSGTTVQDVNKLLKMH
QEMATAMKRIKKMGGMKGMLSMLGKGGMGGLGNALGGQGLGDMMGKMDAPGALPGLGGPD
GMKLPPGFENLIKKK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatagtctgagcgaccggcttggtggggtgttcgaccgcttgcgcggtcgcggc
gcgctgaccgaggccgatgtccgctcggcgatgcgcgaggtgcgggtcgccctgctcgag
gccgacgtcgcgctgccagtcgcgcgcaagttcgtcgacgacgtcaccgaaaaggcggtc
ggccacaacgtcctgcgctcgatcacgccggggcagcaggtcgtcaagatcgtcaacgac
gcgctggtcgagatgctggggtcggagaataccggcctcgacctcgacgtcaccccgccg
gcggtggtcatgctcgtgggcctccagggctcgggcaagacaaccacgaccgcgaagctc
gcgaaactgctgtcggggcgcgagcgcaagaaggtcatgatggcgtcattggacgtcaat
cgccccgccgctcaagagcagctggcggtgctcggcacgcaggtagaggttgcgacgctg
ccgatcgtcgccggccagcagccggtcgatatcgcccgccgcgcgctccaggcggccaag
ctccagggctatgacgtcctgatgctcgacaccgccggccgccttcacgtcgaccaggcg
ctgatggacgagatgaaggctgtcgccgacatcgcgacgcccaatgaaatcctgctcgtc
gtcgacagcctgaccggccaggacgcggtcaacgtcgcccagaacttcagcgaccaggtg
ccgctgaccggcgtgatcctgacccgcatggacggcgacgcccgcggcggcgccgcgctg
tcgatgcgcgcggtcaccggtaagccgatcaagttcgccggcgtgggtgagaagctcgac
gcgatcgagccgttccatccgggccgcgtcgccgggcgcatcctcggcatgggcgacgtc
gtctcgctggtcgaaaaggccgcgcagtcgatccaggcagaagatgccgagcggatggcc
gcgcggatcgagaagggcaagttcgacctcaacgacctgcgcagccagctcgcccagatg
cgccgcatgggcggcctcggcgcgctcgccggcatgatcccgggcatgaagaaggcgcag
gcggcgatggcgtcgggcgcggtggacgagaagatcctgctccgcatggacgcgatgatc
gggtcgatgaccgtcaaggagcgcgccaagcccgagatcatcagcgccaagcgcaagatc
cgcgtcgccaaggggtcgggcaccacggtgcaggacgtcaacaagctgctgaagatgcat
caggaaatggcgaccgccatgaagcgcatcaagaagatgggcggcatgaaggggatgctg
tcgatgctgggcaagggcggcatgggcggccttggcaatgcgctgggcggtcagggtctg
ggcgacatgatgggcaagatggatgcgcccggcgcgcttcctggtctcggcgggcccgac
ggcatgaagctgccgcccggcttcgaaaatctcatcaagaagaagtga
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