Sphingomonas donggukensis: M9980_06095
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Entry
M9980_06095 CDS
T08944
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sdon
Sphingomonas donggukensis
Pathway
sdon00330
Arginine and proline metabolism
sdon00480
Glutathione metabolism
sdon01100
Metabolic pathways
sdon01110
Biosynthesis of secondary metabolites
sdon04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
M9980_06095
09106 Metabolism of other amino acids
00480 Glutathione metabolism
M9980_06095
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
M9980_06095
Enzymes [BR:
sdon01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
M9980_06095
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
URW76767
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Position
1245725..1246954
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AA seq
409 aa
AA seq
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MHNDHRALGLAVPSTADNAVAIAKGAPVQPVTLVRPHAAARAARFFVEKFPGRSMYAVKA
NPSPDLLHILWDSGITHYDVASLGEVRLVARELPEATLCFMHPVKAEEAIHQAYFEHGVR
TFSLDSLEELEKIVRATTWNGVAAADLTLCVRIRVSSDLSKLSLASKFGVMPDEAKALLF
AARQAADALGICFHVGSQAMSPDAYAQAMERVRAAIVEAAVTVDVIDVGGGFPSVYPGME
PQALERYFETIHRAFESLPVSYSSELWCEPGRALCAEYSSLIVRVEKRRGDELFINDGAY
GALFDAAHIGWRFPVRLLREPDSRAKDMAFSFYGPTCDDLDHMTGPFLLPADVQAGDYIE
VGMLGAYGCAMRTTFNGFGSDQTVIVTDEPMASLYVAADERVASNVVTL
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
ttgcacaacgatcatcgagcgctggggctagctgtcccctcgacggccgacaacgccgtc
gcaatcgccaagggcgcaccggtccagccggtgacgctcgttcgtccgcacgccgctgcg
cgcgccgcccgcttcttcgtggagaagtttccgggccggtcgatgtatgcggtgaaggcg
aacccgagcccggacctgctccacatcctgtgggacagcggtatcacgcattacgacgtc
gcgtcgctgggtgaagtgcggctggtggcgcgcgagctgccggaggcgaccctgtgcttc
atgcacccggtcaaggccgaggaagcgatccaccaggcgtatttcgaacacggcgtgcgc
accttcagcctcgattcgctcgaggagctggagaagatcgtccgcgcgacgacgtggaac
ggcgtggccgccgcggacctgacgctgtgcgttcgcatccgcgtgtcgtcggacctgtcg
aagctgtcgctcgcgtccaagttcggggtgatgcccgacgaggccaaagcgctgctgttc
gcggcacgccaggcggccgacgcgctcggcatctgtttccacgtcggtagccaggcgatg
tcgcccgacgcctatgcgcaggctatggagcgggtgcgcgcagccatcgtcgaggcggcg
gtgacggtcgatgtgatcgacgtcggtggcggcttcccatccgtctatcccggcatggag
ccgcaggcgctggagcggtatttcgagacgatccaccgcgcgttcgaatcgctgccggtc
agctattcgtcggaactgtggtgcgaacccggccgcgcgttgtgcgccgaatattcgtcg
ctgatcgtgcgcgtcgagaagcgtcgcggcgacgaactgttcatcaacgacggcgcctat
ggcgcgctgttcgacgccgcgcacatcggctggcgctttcccgtccgcctgctgcgcgag
ccggacagccgcgcgaaggacatggccttcagcttctacggcccgacgtgcgacgacctc
gaccacatgaccgggccgttcctgctgcccgcagacgtccaggccggcgactatatcgag
gtcgggatgctcggcgcctatggctgcgcgatgcggacgacgttcaacggcttcggatcg
gaccagacggtgatcgttaccgacgaaccgatggcgtcgctgtacgttgccgcagacgag
cgggtcgcgtcgaacgtcgtcacgctgtaa
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