Sphingomonas donggukensis: M9980_06560
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Entry
M9980_06560 CDS
T08944
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sdon
Sphingomonas donggukensis
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdon03400
]
M9980_06560
Enzymes [BR:
sdon01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
M9980_06560
DNA repair and recombination proteins [BR:
sdon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
M9980_06560
Prokaryotic type
M9980_06560
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
URW76851
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All DBs
Position
complement(1335818..1337170)
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AA seq
450 aa
AA seq
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MTAPVLLWLRQDLRLHDQPALVAAAHEGAVIPIYVRDDDAPGKWRTGAAQRWWLHHSLKS
LDTALRAKGSRLILRKGDAVTELRKLCEESGATAIHAIRHYEPWWRKAEDALGDRLTLHD
GNHLAPIEDVTTGAGGLFKVYSSFWKALATRMPPEDPLPMPRTIQAPAKWPKSEALADWK
LLPTKPDWSGGFDVWTPGEDAARKQAKDFGDAVAAYDVDRNLPSIDGSSRLSPHLHFGEI
SARDVWHLVGGGRAALTFHKELAWRDFTRGVILDRPDYGDHNGREKFDALPWRRSEKDVA
AWRQGRTGYPIVDAGMRQLWATGWMHNRVRMIAASFLIKHLLVDWRVGERWFWDTLVDAD
YANNSVNWQWVAGTGIDSNMWGRIMAPLVQSEKFDAAGYIREWVPELAKLSDDLIHDPDA
HGCRPRDYPRKIIGHREARERALEAGRAAR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacccgtgctcctctggctccgccaggacctccgcctccacgaccagcccgcg
ctcgtcgcagcggcccatgaaggcgcagtcatccccatctatgtccgcgacgacgatgcg
ccaggcaaatggcgcaccggcgccgcccaacgctggtggctccatcacagcctgaaatcg
ctcgacaccgcgctccgcgccaagggctcacgcctgatcctccgcaaaggcgacgccgtc
accgagcttcgcaaactctgcgaggaaagcggcgcaaccgccatccacgccatccgccat
tacgaaccatggtggcgcaaggccgaggacgcgctcggcgaccgcctcacgctgcacgac
ggcaaccacctcgccccgatcgaggacgtgacgaccggcgctggcggcttgttcaaggtc
tattcgtctttctggaaggcgctcgcgacacggatgccgcccgaagacccgctcccgatg
ccgcgcacgatccaggctcccgccaaatggccgaagagcgaagccctcgccgactggaaa
ctgctgccgaccaagcccgactggtcgggcggcttcgacgtctggacgcccggcgaggat
gccgcgcgcaagcaggccaaggacttcggtgatgcggttgcggcgtatgacgtcgatcgc
aacctgccctcgatcgacgggagctcgcgcctgtcgccgcacctccacttcggcgagatt
tcggcgcgcgacgtctggcatctcgtcggcggcggtcgcgcggcgcttacctttcacaag
gagctggcgtggcgcgatttcacgcggggcgtcatcctcgaccgcccggactatggcgac
cacaatggccgcgaaaaattcgacgcgctgccgtggcgccgctcggagaaggacgtggcg
gcatggcgtcaggggcgcaccggctatccgatcgtcgatgccggcatgcgccagctttgg
gcgaccggatggatgcacaaccgcgtccgcatgatcgccgcgtcattcctcatcaagcac
ctgctggtcgactggcgggtcggcgagcgctggttctgggacacgctggtcgacgccgat
tacgccaataattcggtcaactggcagtgggtcgcgggcaccggcatcgattcgaacatg
tggggccggatcatggcgccgctggtccagtcggagaaattcgatgccgccggctatatc
cgcgaatgggtgcccgagcttgccaagctgtcggacgacctgatccacgatcccgatgcc
cacggctgccgcccgcgcgactatccgcgcaagatcatcggccaccgtgaggcccgcgaa
cgcgcgctggaagcggggcgcgccgcacgctga
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