Sphingomonas donggukensis: M9980_07650
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Entry
M9980_07650 CDS
T08944
Symbol
cydB
Name
(GenBank) cytochrome d ubiquinol oxidase subunit II
KO
K00426
cytochrome bd ubiquinol oxidase subunit II [EC:
7.1.1.7
]
Organism
sdon
Sphingomonas donggukensis
Pathway
sdon00190
Oxidative phosphorylation
sdon01100
Metabolic pathways
sdon02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
M9980_07650 (cydB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
M9980_07650 (cydB)
Enzymes [BR:
sdon01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
M9980_07650 (cydB)
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Motif
Pfam:
Cyt_bd_oxida_II
Motif
Other DBs
NCBI-ProteinID:
URW74462
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All DBs
Position
complement(1555593..1556597)
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AA seq
334 aa
AA seq
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MSVSIDLATAWAFIIAFAVFAYVVLDGFDLGIGILFPAFGVGEERDQAMNSIAPVWDGNE
TWLVLGGGGLMAAFPLAYAIVLPALYPPMIAMLLALVFRGVAFEFRWRDPAHRAFWDFAF
TAGSVTAAFAQGVTLGALLQGIKVANRSYAGGWLDWLTPFSLLTGASVVAGYALLGACWL
IWKTEGGAQDHAFRLAKRAGVITLAAIVAVSAATPFLQGRYFARWFAWPAILEVAIVPVL
VAVLSIAFVRALAKRHERAPFLLVLALFGLSFAGLGISIFPTIVPPDVTIWQAAAPENAQ
VFMLIGAGIMVPIILAYTAWAYWVFRGKVGEGYH
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtctcgatcgatctcgccaccgcctgggcgttcatcatcgcctttgccgtgttc
gcctatgtcgtgctcgacggcttcgatctgggcatcggcatcctgttcccggcgttcggg
gtgggggaggagcgcgaccaggcgatgaattcgatcgcgccggtgtgggacgggaacgag
acgtggctggtgctgggcggcggcgggctgatggcggcgttcccgctcgcctatgccatc
gtcctgcccgcgctctacccgccgatgatcgcgatgctgctggcgctcgttttccgcggg
gtggcgttcgaattccgctggcgcgatcccgcccaccgcgcattctgggacttcgccttc
accgccggatcggtgaccgcggcgtttgcgcaaggcgtgacgctcggcgcgctgctccag
gggatcaaggtggccaaccgatcctacgccggcggctggctcgactggctgaccccgttc
tcgttgctgaccggcgcgagcgtcgtcgcgggctatgcgctactcggcgcgtgctggctg
atctggaagaccgaaggcggcgcgcaggaccacgccttccgcctcgccaagcgcgcgggc
gtcatcacgctggccgcgatcgtcgcggtcagcgcggcgactccgttcctgcaaggccgc
tacttcgcgcgctggttcgcgtggccggcgatcctggaggtggcgatcgtgccggtgctg
gttgcggtgctcagcatcgccttcgtccgtgcgctcgccaagcgccacgaacgcgcgccg
ttcctgctggtgctggcgctgttcggcctgagcttcgcgggcctgggcatcagcatcttc
ccgacgatcgtcccgcccgacgtcaccatctggcaggccgccgcgcccgaaaacgcgcag
gtcttcatgctgatcggcgccggcatcatggtgccgatcatcctcgcctatactgcctgg
gcctattgggtgttccgcggcaaagtgggcgagggctatcactga
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