Sphingomonas donggukensis: M9980_08680
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Entry
M9980_08680 CDS
T08944
Name
(GenBank) VCBS domain-containing protein
Organism
sdon
Sphingomonas donggukensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_4
HemolysinCabind
Big_9
Cadherin_5
Motif
Other DBs
NCBI-ProteinID:
URW74652
LinkDB
All DBs
Position
complement(1761824..1768255)
Genome browser
AA seq
2143 aa
AA seq
DB search
MTLATSYTFSGKGNWSLDGAPGTGGTFQVEVPTGSAVQKTFLYVTSYGNVAPTSITLGTT
VLTTFEFLGQIQSNGLRTYRVDVTAVVASIVGSGSATTFDIPVRNSGSGGANIDGFALTT
VYSNPAETSRTIVFADGAGNPAGDQFAIGFANGVDKTLPGFQAIMSVGIDFSYQGGGSQQ
QSTIDVNGRRLTSSAGGSDDGADANGALITIGGVGDSIANPADPNAGTTGTRYDDELYDL
SGFLAQGATSANIVTRNASGDDNIFFVGLNITAEATVSAGSNVAPTVDLNGTATGIDFAA
AYTEDGAAAAIASGAVIADANEAGGDRVVSVTVRIVGTQAGDTLSIAGTLPSGITASQPV
VQGGDLVLVLSGAATGAAYSTAINQVRYGTTSDTPTATTATRTITVVANDGEANSAVATT
TLTITPHDDTPAIADTATTDETSAVTGNVLANDTDPDGGPAATVTAVNGSTAGVGTQVTL
ASGALLTLNADGSYSYDPNGKFEYLALVGSSPDAVTKATDSFTYTNSGGVTATVTITVNG
VDNKDVITITSATPQTIATGIDDDVVNASGSGAYTVDAGSGNDRVTTGSGNDHVDGGEGD
DEIETGAGNDVVLAGGGNDIVHGGAGAGDDFYDGQSGTDTLVYPSTSQGVYVDMNLDNRA
SNAAIAAILTNAGLPTDTLVGFATGVEIGTDAFRNFENVTGGSGDDRIFGNADVNVINGG
NGADFISGGGGNDVLDGGAGFDTLYYGNVTNAVQVNLVSGQVNAGVQGGVDTIANFENFA
LGSGDDQFIGDDNDNVVEGGGGNDQIDGGGGFDTVIYGTSMVSDGMAQQAFGTLQVNASA
AGLGIDTLTNIERIQFISPAETVSIQVVGGNAVVYSRADTGGVQQLGTLTVAAASGVLAN
DINLDQGAGDQKMVSAIAFNGVAGSVGQPLAGNNGTLTIHADGSYNYVANAGTRALPAGV
TAIDQFVYTADDGDLGDSTPTTLTITITGTNDGASISGVSRGDVTEDVAVTGGNLTATGQ
LIATDPDTGESQFQARTVAGGNGYGSFTLQANGTWVYTVNNALPAIQALGAGDQLADGFM
ATTLDGSASIRVKVTITGTNDAVTLTGGTLATIDDTGATDSFAAVTGQIDTTSAATVGAG
MVGNLSDADVGDVYTYSLTGTPDTTYGTLTLNPDGSYSFAPNAAAINALTAPTSVSYTVA
VTDNAGSTSTATFTVQINGVNDTATLTGSFGATVVEDNPNSFGFLKALGTIVTSDVDAGQ
AHTAVQTGVQGTYGTFSINADGAWRYLAPNDQPSIQALGAGEVAYDSFTVTSQDGSASQV
VTIRIEGTNDRPMLQGGSLATYDDTAAYDDFQDVSGRIDSIAHSVMVLRVAQPPVGDLTD
ADANGTYTFSRAGSASENATNDAYGTLTVNPDGSYTFAPNDAAINALTQAVTLSYTIMVD
DGSGATNATNTGTFTITLNGAQDTAIVGGALTASVTEDVNVVTRPNDMHVIRVSGTLTVT
DADTGESSFQAQDITGTYGSLVVRTDGLYTYVVDNDARAVQEIAVGDSRSESFTVRTADG
TAQVVTFTINGTNDAPIVNGSQLFDSATGNGSIATAISLDGLFAKGLDAQVIGAATVPFV
TIRGTATADVIDHYSFTVGAGGSAVTIDVDNPRNGEFGVDTTIVIYDAQGNVVARNDDNG
SDPLETYSLASMIQVVLPAGTYTVAIDRFPGLGNDSPANPLTAGTTFDMHVSVANPAFPA
GGARIVQAVTESDAPIAVIGSLKVTDDVGDTFGFSHTAGEGTVVGNGVVLTSTQIDALVA
GFSIDPVTGVYSFTAEALDFLDPGQSVDATFNVRITDTHDAVTVEAVTIHIDGTLEAGPA
GTPNDDNLQGGLFGDLIFGGTGDDFIFGRNGNDVIHGGDGDDNLAGGTGNDTLYGEGDDD
TLSGGTGNDVLHGGMGSNIVDGGSGTDTGVLEGNYNDYTITRGAGSNVTFANANGMETTS
FVNVEQFRFANGVVLTLGANGSDMFDLSGATQPVTLSTGAGQDLLTYTGAAQSSGTGYDS
FPDFDYASDVIRIGGTHDSYASVSGGALNTASFNDDLAASIGAQLTGGAAVFFTPNAGDL
SGSTFLVVNANGVDGYQPGQDYVFHMPAPPAVVPDFLVAPVLP
NT seq
6432 nt
NT seq
+upstream
nt +downstream
nt
atgacactggcaaccagctatactttcagcggcaagggcaattggtcgctggacggtgcg
cccggtacgggcgggactttccaggtcgaggttccgaccggatccgccgttcagaagacg
ttcctgtacgtcacgtcctacggcaacgtcgcgccgacatcgatcacgctcggcacgacg
gtgctgacgacctttgaatttctcggccagatccagagcaacgggctgcgcacctaccgc
gtcgacgtcaccgcggtggtcgcctcgatcgtcggcagcggcagcgccacgacgttcgat
atcccggtgcgcaattccggttccggcggggccaacatcgacggcttcgcactgacgacg
gtttattcgaatcccgcggagaccagccgcacgatcgtcttcgccgacggcgcgggcaat
cccgccggcgaccagttcgcgatcggcttcgcaaacggcgtcgacaagacgctgcccggc
ttccaggcgatcatgtcggtcggcatcgatttcagctatcagggcgggggctcgcagcag
cagtcgacgatcgacgtcaacggtcggcgccttacctcgtcggccggcggatcggatgac
ggcgccgatgcgaacggtgcgctcatcaccatcggcggtgtcggcgattcgatcgccaat
ccggccgatccgaatgcggggaccaccggaacgcgctacgacgacgagctctacgacctg
agcggcttcctggcgcagggcgcgacgtccgcgaacatcgtgacgcgcaatgccagcggc
gacgacaacatcttcttcgtcggccttaatatcaccgcggaagcgaccgtgtctgcgggt
tcgaacgtggccccgaccgtcgacctgaacggcaccgcgaccggcatcgactttgccgcc
gcctataccgaggacggcgcggctgcggcgatcgcatcgggcgccgtgatcgcggatgcc
aacgaagccggcggcgaccgcgtcgtgtcggtgacggtgcgcatcgtcgggacgcaggcg
ggcgacacgctgtcgatcgcgggtaccttgccgagcgggatcaccgcctcgcagccggtc
gtacagggcggcgacctggtgctcgttctgtcgggcgcggccacgggtgcggcctattcg
accgcgatcaaccaggtccgctacggcaccaccagcgacacaccgacggcgaccacagcc
acccgcacgattaccgtggtcgccaacgacggtgaggcgaacagcgcggtcgcgaccacg
accctgacgatcacgccgcacgacgacacgcccgccatcgccgacaccgcgaccacggac
gagacctcggcggtcaccggcaacgtgctcgccaacgataccgatccggacggcggccct
gccgcgaccgtgaccgcggtcaacgggtcgaccgctggcgtcggcacccaggtgacgctc
gcgtccggcgcgctgctgacgctgaatgccgacggcagctacagctacgatcccaacggc
aagttcgagtatctggcgctggtcggctcgtcgcccgatgcggtgacgaaggcgaccgac
agcttcacctacaccaacagcggcggcgtcaccgccaccgtgacgatcacggtgaacggg
gtcgacaacaaggacgtgatcacgatcaccagcgccacgccccagacgatcgcgaccggc
atcgacgacgacgtcgtcaatgcatcgggcagcggcgcgtacacggtcgacgccggcagc
ggcaacgaccgcgtcaccaccggcagcggcaacgaccatgtcgacggcggggagggcgac
gacgagatcgagaccggtgccggcaacgacgtcgtgctggccggtggcggcaacgacatc
gtccacggcggcgccggcgcgggcgacgacttctacgacggccagtccggcaccgacacg
ctggtatacccgtcgacgtcgcagggcgtgtacgtcgacatgaatctcgacaatcgcgct
tcgaatgcggcaatcgctgcgattcttacgaatgccggattgcccaccgacacgctggtg
ggcttcgctaccggtgttgagatcggcaccgatgccttccggaatttcgagaatgtcacc
ggcggttctggtgatgatcgtatcttcggcaacgccgacgtgaacgtcatcaacggcggc
aacggcgcggacttcatctcgggtggtggtggaaacgacgtgctcgatgggggtgctggc
ttcgacaccctctactatggcaacgtgaccaatgcggttcaggtcaaccttgtttcgggt
caggtgaatgccggcgttcagggcggcgtcgacacgattgcgaacttcgagaattttgcg
ctcggttcgggcgacgatcagttcatcggcgacgacaacgacaatgtcgtcgaaggtgga
ggtggcaacgatcagatcgacggcggtggcggcttcgataccgttatctacggcacgtca
atggtgtcggacggcatggcgcagcaggcgttcggaacgcttcaggtcaatgcgtcggcg
gcaggtctcgggatcgacacactcacgaatatcgagcggatccagttcatcagtcctgcg
gaaaccgtcagcatccaggtcgtcggcggcaatgcggtggtttacagtcgcgccgacacc
ggtggtgtgcagcaactcggcacgctgacggtagcggcggcgtcgggcgtcctcgccaac
gacatcaacctcgaccagggtgccggcgaccagaaaatggtgagcgcgatcgcgttcaac
ggcgtggccggcagcgtcggtcagccgctggccggcaacaacggcacgctcacgatccac
gccgacggcagctacaactatgtcgcgaacgctggcacgcgcgcgctgccggcgggcgtc
accgcgatcgaccagttcgtctataccgccgacgacggcgacctgggcgattcgaccccg
acgacgctgaccatcaccattaccggcaccaacgacggcgcgtcgatcagtggcgtctcg
cgcggggacgtgacggaggatgtcgcggtgacggggggcaacctgaccgcgaccggccag
ctgatcgcgaccgatcccgacacaggcgaatcgcagttccaggcgcgcacggtggcgggg
ggcaacggctatggcagcttcacgctccaggcgaacggcacctgggtctataccgtcaac
aacgcgctgccggcgatccaggcgctcggcgcgggcgatcagttggccgacgggttcatg
gcgaccacgctcgacgggtcggccagcatccgcgtgaaggtgacgatcaccggcaccaac
gatgccgtgacgctgaccgggggcacgctcgccaccatcgacgataccggcgcgaccgac
agcttcgccgcggtcaccggccagatcgacaccacctccgccgcgacggtcggggcgggc
atggtcggaaacctcagcgacgccgatgtcggcgacgtctatacctacagcctgaccggc
acgcccgacacgacctacggcacgctgacgctcaaccccgacggaagctacagcttcgcg
ccgaacgccgcggccatcaacgcgctcaccgcgccgactagcgtcagctatacggtcgcg
gtcaccgacaatgccggatcgacctccaccgccacgttcacggtccagatcaacggcgtc
aacgacaccgcgacgctgaccggatcgttcggcgcgaccgtggtcgaggataatccgaac
agcttcggcttcctgaaggcgctcggcacgatcgtgacgagcgacgtcgatgccggccag
gcgcataccgcggtgcagacgggggtgcagggcacctacggcaccttctcgatcaacgcc
gacggggcgtggcgctatctggcgcccaacgaccagccgtcgatccaggcgctgggcgcg
ggtgaggtcgcctatgacagcttcacggtgacgtcgcaggacggcagcgccagccaggtc
gtgacgattcggatagagggcaccaatgatcgcccgatgctccagggcggatcgctggcg
acgtatgacgacaccgcggcctatgacgatttccaggacgtgtcggggcggatcgattcg
attgcgcattccgtcatggtgctgcgcgtcgcgcagccgccggtcggcgacctgaccgac
gcggatgccaacggcacatacaccttctcgcgcgcgggatcggcgagcgagaacgcgacc
aacgacgcctatggaacgctgacggtcaacccggacggcagctataccttcgccccgaac
gacgccgcgatcaacgcgctgacgcaggcggtcacgctcagctacacgatcatggtcgat
gacgggtcgggggcgaccaacgccaccaacaccggcacgttcacgatcaccctgaacggc
gcccaggataccgcgatcgttggcggcgccctgacggcttcggtgaccgaggacgtcaac
gtggtgacgcgtccgaacgacatgcacgtcatccgcgtgtcgggcacgctgacggtgacc
gatgccgacacgggcgaatcctcgttccaggcgcaggacatcaccggaacctacggctcg
ctcgtggtgcgcacggacggcctgtacacctatgttgtcgacaacgacgcccgcgcggtg
caggaaatcgcggtcggcgacagccgcagcgaaagcttcaccgtccgcaccgccgacggc
actgcacaggtcgtgaccttcacgatcaacggcaccaacgacgcccccatcgtcaacgga
tcgcagctgttcgacagcgcgaccggcaacggcagcatcgccaccgcgatcagcctcgac
ggactgttcgccaaggggctggacgcgcaggtgatcggcgcggcgacggtaccgttcgtc
acgatccgcggcaccgcgaccgccgacgtcatcgaccactacagcttcaccgtcggtgcc
ggcggcagcgcggtcacgatcgatgtcgacaatccgcgcaatggcgaattcggcgtcgat
accacgatcgtgatctatgacgcgcagggcaatgtcgtcgcgcgcaacgacgacaacggc
tcggatccgctcgagacctacagcctggccagcatgatccaggtcgtgctgcccgcgggc
acctacaccgtcgcgatcgaccggttccccggcctcggcaacgacagccccgccaatccg
ctgacagccgggacgaccttcgacatgcatgtctcggtcgccaatcccgccttcccggca
ggcggcgcgcgtatcgtccaggccgtgaccgaaagcgatgcgccgatcgcggtcatcggg
tcgctgaaggtcaccgacgacgtcggcgacaccttcggcttcagccatacggcaggcgag
ggcaccgtcgtcggcaacggggtggtgctcacctcgacgcagatcgacgcgctcgtcgcg
ggcttctcgatcgatccggtgacgggcgtgtacagcttcacggcggaggcgctcgacttc
ctcgatccggggcagagcgtcgatgcgaccttcaacgtgcgcatcaccgacacccatgat
gccgtgacggtcgaggcggtgacgatccacatcgacggcacgctggaggccgggccggcg
ggcacgcctaacgacgacaacctccagggcgggctgttcggcgacctcatcttcggcggg
accggcgacgacttcatcttcggacgcaacggcaacgacgtgatccacggcggcgacggc
gacgacaaccttgccggcggcaccggcaacgatacgctctatggcgagggtgacgacgac
acgctgtcgggcggcaccggcaacgacgtgctgcacggtggcatgggcagcaacatcgtc
gacggcggatcgggcaccgataccggcgtgctggagggcaattacaacgactatacgatc
acgcgcggcgccggcagcaacgtcaccttcgccaacgcgaacgggatggagaccaccagc
ttcgtcaacgtcgagcagttccgcttcgccaacggcgtcgtcctgacgctgggtgcgaac
gggtcggacatgttcgacctgtcgggggcgacccagccggtcaccctatcgacgggcgcc
ggccaggatctgctgacctacaccggggcggcccagtcgagcggcaccggatatgatagc
ttccccgacttcgactatgccagcgacgtgatccgcatcggcggcacgcacgacagctat
gccagcgtgtcgggaggcgcgctcaacaccgcatcgttcaacgacgaccttgcggcgtcg
atcggcgcgcagctgacaggcggagcggcggtgttcttcacgcccaacgccggcgacctg
tcgggcagcacgttcctggtggtcaatgccaacggcgtcgacgggtaccagccgggccag
gactatgtgttccacatgccggcccccccggcggtggtgccggacttcctggtcgcaccg
gtccttccctga
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