Sphingomonas donggukensis: M9980_11060
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Entry
M9980_11060 CDS
T08944
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
sdon
Sphingomonas donggukensis
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdon03000
]
M9980_11060
Transcription factors [BR:
sdon03000
]
Prokaryotic type
Helix-turn-helix
LysR family
M9980_11060
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Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_IclR
HTH_30
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
URW75093
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Position
complement(2256076..2257299)
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AA seq
407 aa
AA seq
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MVSPFDLNLRHLGAIPAIVRLGNMSAAAEASNLSQPALTQGLAKIERQLGVKAFERAPGG
MIPTPEGRLIAARVDAAFGHLTQATRYAGRHRRGFNRPERLMTATQLRSYLALADAGSFV
DAARATGWSQPALHRAVRDLEQLFASPLVERRGRGIALSADGRAVARGIRLAASELAAAI
AELRPDQSMTGRLVVGAMPLSRAWLLPRAIAKLLAEAPGATMAVVEGSWSELVEPLRDGE
IDIMIGALRAEIPVGLDQQPLLEDRLAVLARHDHPLAAATALTRAELARYPWIVGPVGSP
IRAHWERLFAGDSPPPQPVECGSVITIRGVLAQSDCLTLLSTDQVAVEIAAGILKPLTFA
DPELVRVIGLTARSDWRPTGLQQRLIEILRRTGEEATSGNRIVEQAK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcgccgttcgatctgaatctccgccatctcggcgctatcccggcgatcgtccgc
ctcggcaacatgagcgctgccgcagaggcatccaatctgtctcagccggcgctgacgcag
ggactggcgaagatcgagcgccagttgggagtgaaggccttcgagcgcgcgcccggcggc
atgatcccgaccccggaggggcggctgatcgctgcgcgggtggacgcggcgttcggtcat
ctgacccaggcgacccgctacgccggccggcatcgccgcgggttcaaccgtcccgagcga
ctgatgaccgcgacccagcttcgctcctatctcgcactcgccgatgccggcagcttcgtt
gatgccgcgcgtgcgaccggctggtcgcaaccggcgctccaccgtgcggtccgcgatctg
gagcagctgttcgcgtcgccgttggtcgagcgtcgcggtcgaggcatcgcgctgagtgcc
gacggccgggccgttgcccgcgggatacgtcttgccgcgagtgaactcgcagccgccatt
gccgagctgcggcccgatcaaagcatgacggggcgcctcgtcgtgggcgcgatgccgctt
tcacgtgcgtggctgctgccgcgtgcgattgctaaacttctcgccgaggcgccgggagcg
acgatggcggtggtagagggcagctggagcgagttggtggagccgctgcgtgatggcgag
atcgatatcatgatcggtgcattgcgagccgagatcccggtcgggctggaccagcagcca
ctgctggaggacaggcttgccgtccttgcgcgacacgaccatcccctcgccgccgccacc
gcgctgacccgcgccgagctggcgcgctatccctggatcgtcgggccggtcggatcgccg
atccgcgcgcactgggagcgcctgttcgcaggcgacagtccgccgccgcagccggtcgag
tgtggctcggtcatcactatccgcggggttcttgcgcaaagtgactgcctgaccctgctt
tcgaccgatcaggtggcagtggaaatcgccgcaggcatcctgaagcccctcacttttgca
gatcctgagctggtgcgcgtgatcgggctgacggcgcgaagcgattggcgtccgaccggg
ttgcagcagcgcctgatcgagattctgcgcaggaccggcgaggaagccacttccggaaat
cggatagttgaacaggcaaagtga
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