Sphingomonas donggukensis: M9980_11385
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Entry
M9980_11385 CDS
T08944
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
sdon
Sphingomonas donggukensis
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdon03016
]
M9980_11385 (miaB)
Enzymes [BR:
sdon01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
M9980_11385 (miaB)
Transfer RNA biogenesis [BR:
sdon03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
M9980_11385 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
IMPDH
DUF6716
Motif
Other DBs
NCBI-ProteinID:
URW75144
LinkDB
All DBs
Position
complement(2321749..2323053)
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AA seq
434 aa
AA seq
DB search
MPTPKTFHVKSFGCQMNVYDGERMAEAMAAAGYASAADATDADVVVLNTCHIREKATEKV
YSDIGRMKKRRPDQMIAVAGCVAQAEGAEIIRRAKVDVVVGPQAYHNLPQLVADAATGAP
TLDTDMPLLSKFGALPARRRVGPSAFLTVQEGCDKFCTYCVVPYTRGAEVSRPFDAIVEE
AKALVDAGAKEITLLGQNVNAWSDGKQDLGSLIRALDRVDGLARIRYTTSHPNDMTQGLI
DAHAEVPSLMPFLHLPVQSGSDRVLKAMNRSHSRDSYLRVLERVRAARPDIALSGDFIVG
FPGETEAEFEDTLSLVAEVRHAMAFSFKYSPRPGTPAADMAGQIAAEVMDDRLQRLQAVL
NRDQEAFNQATVGKRCTILIERAGKKPGQMLGKSPWLQSVIVEDGPPVGSLIEVDIVAAW
PNSLVGVAAVAQAA
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccccaaaacctttcacgtcaagtcgttcggctgccagatgaacgtctatgac
ggcgagcgcatggccgaggcgatggccgccgccggctatgcgtctgcagcggatgcgacc
gatgccgatgtcgtcgtgctgaacacctgccatatccgcgagaaggcgaccgagaaggtc
tattccgacatcggtcggatgaagaagcgccgccccgaccagatgatcgcggtcgccgga
tgcgtcgcgcaggccgagggcgcggagatcatccgccgcgcgaaggtggacgtcgtcgtc
ggaccgcaggcgtatcacaatctgccgcagctggtggccgacgcggcaacgggcgcgccc
acgctcgacaccgacatgccgctgctgtcgaagttcggtgcgctccccgcccgccgccgg
gtcggcccgtcggcgttcctgaccgtgcaggagggatgcgacaagttctgcacctattgc
gtcgtcccctacacccgcggcgcggaggtcagccgcccgttcgacgcgatcgtcgaggaa
gcgaaggcgctggtcgacgccggagcgaaggaaatcacgctgcttggccagaacgtcaac
gcctggtccgacggcaagcaggatctgggcagcctgatccgcgcgctcgaccgcgtcgat
gggctggcgcgcatccgctacaccaccagccaccccaacgacatgacccaggggctgatc
gacgcccatgccgaggtgccgtcgctgatgccgttcctgcacctgccggtccagtcgggc
agcgaccgcgtgctgaaggcgatgaatcggtcgcattcgcgtgacagctacctgcgcgtc
ctcgaacgcgtgcgcgccgcacggcccgacatcgcgctctcgggcgacttcatcgtcggc
ttcccgggcgagaccgaggccgagttcgaggacacgctgagcctcgtcgccgaggtccgc
cacgcgatggcgttcagcttcaaatacagcccccgccccggcacgcccgccgccgacatg
gccggccagatcgcggcggaggtgatggacgatcgcctccagcggctccaggccgtgctc
aaccgcgatcaggaggcgttcaaccaggcgacggtcggcaagcgctgcaccatcctgatc
gagcgggcgggcaagaagcccgggcagatgctgggcaagtcgccgtggctgcaatcggtg
atcgtcgaggacgggccgccggtgggcagcctgatcgaggtcgatatcgtcgcggcctgg
cccaattcgctggtcggcgtcgccgcggtcgcgcaggccgcctga
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