Sphingomonas donggukensis: M9980_12135
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Entry
M9980_12135 CDS
T08944
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
sdon
Sphingomonas donggukensis
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdon03016
]
M9980_12135 (mnmE)
Transfer RNA biogenesis [BR:
sdon03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
M9980_12135 (mnmE)
Prokaryotic type
Methyltransferases
M9980_12135 (mnmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmE_N
MnmE_helical
MMR_HSR1
FeoB_N
Dynamin_N
ABC_tran
AAA_29
AAA_28
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
URW75280
LinkDB
All DBs
Position
2459676..2460962
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AA seq
428 aa
AA seq
DB search
MTDTIFAVSSGAVPSAIAVLRVSGPGAFAAVARLAGTLPPPRHAGLRAIRGADGALIDRA
VVLTFSGPASVTGEDIAEIHLHGGRAVVAAVSGALRDMTGLRDAEPGEFTRRALEAGRID
LTEAEGLADLLAAETEGQRRAAMRAADGTLRRRIEAWSARAVALSALVEAAIDHDDEDDV
GDAAALLARVARDADDLAREIAMLLDQPPVERLRDGIRVVLAGPPNSGKSTLLNAMVGRD
AAIVSPIAGTTRDRIEAPVVRGGIAWLFTDTAGLAVETDDVIEAVGIARAQASIAEADIL
LWLGDAAPPRADALAVHARVDVAGREITPEGRIAASGVRPGGEAALWTALEHRAATLLPT
ADVPALNARQRELCRGAASNLRDAAEASDPLLVAEDLRSARRAFDRLTGRADTEAVLDAL
FAGFCIGK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgactgacacgatctttgcggtgtcgagcggcgcggtgccctcggcgatcgcggtcctg
cgggtgagtgggccgggagcattcgcggcggtggcccggctggccggcaccctgccgccg
ccgcgtcacgccggtctgcgcgcgatccggggggcggacggggcgctgatcgaccgggcg
gtggtgctgaccttttcgggcccggcgagcgtgaccggcgaggatattgcagagattcac
ctccacggcgggcgcgccgtcgtcgcggcggtgtcgggcgcgctacgcgatatgaccgga
ctgcgcgatgccgagcccggcgaattcacccgccgtgcgctggaagcggggcgcatcgac
ctgaccgaggcggaggggctcgccgacctgctcgccgccgaaaccgaagggcagcgccgt
gccgcgatgcgcgccgccgacggcaccctccgccgccggatcgaggcatggagcgcccgc
gccgtcgcgctgtccgcgctggtagaggcggcgatcgaccatgacgacgaggacgacgtc
ggcgacgcggcggcgcttctggcgcgcgtcgcgcgcgacgccgatgacttggcgcgcgag
atcgccatgctgctcgaccagcccccagtcgagcgcctgcgcgacggcatccgggtggtg
ctggcgggaccgccgaacagcggcaagtcgacgctgctcaacgcgatggtcgggcgcgat
gcggcgatcgtctcgccgatcgcgggcacgacgcgcgaccggatcgaagcaccggtggtg
cgcggcggcatcgcgtggctgttcaccgacaccgccggtctggcggtggagacggacgac
gtgatcgaggcggttgggatcgcgcgcgcgcaggcgagcatcgccgaggccgatatcctc
ctctggctgggcgatgctgcgccgccccgcgccgacgcgctagcggtgcatgcgcgggtg
gatgtggcgggccgagagatcacgccagaaggccggatcgcggcgtccggagtgcgaccg
ggtggcgaggccgcgctgtggaccgcgttggagcaccgagcggcgacgctgttgccgacc
gcggatgtgccggcgctcaacgcccggcaacgcgagctatgccgcggtgcagcatcgaac
ctgcgcgatgcagcggaggcgagcgatccgctgctggtcgctgaggatttgcggtcggcg
cgccgcgctttcgatcggctgaccgggcgcgccgataccgaggcggtgctcgacgctctg
ttcgcgggattttgcatcggcaaatga
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