Sphingomonas donggukensis: M9980_12910
Help
Entry
M9980_12910 CDS
T08944
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
sdon
Sphingomonas donggukensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_7
AAA_16
HTH_IclR
AAA_2
AAA_3
MCM
HTH_23
dnstrm_HI1420
Bac_DnaA
HTH_22
HTH_28
Xre-like-HTH
HTH_17
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
URW75419
UniProt:
A0ABY4TSP1
LinkDB
All DBs
Position
complement(2631048..2632478)
Genome browser
AA seq
476 aa
AA seq
DB search
MTRSGQRLLMVIDDEPAQRRLIAAIAGRRGWRTIAAGDPEVAIAQLGTPDGMALDAILLD
SWSPDADTAALIGELRSRRPALPILMLTANNSVAAAVQAMRAGATDFLVKPLSPERLLSA
LDAALGAAGTGELRPLTEKLPASLAFEDIVGAAPQFRAALAIAAKAARARVPVLIEGESG
VGKEVVADALHAASPRAKKPMIRVNCGAIPANLVESELFGHEKGAFTGAFERKIGRFADA
DGGTIFLDEIGEMPLEAQVKLLRVLQSGEIQPIGARHPREVDVRVIAATNKTLADEVAGG
RFREDLYYRLNVVQVTIPPLRDRPGDIAPLARHLLGRVAMQPGLRPLGITDDALSLLVGY
DWPGNVRQLQNALFRAAVLCDGDALTKADFPQIATLAGARATPAGSAGSIVGASGVTLFR
ADGNLRALEEIEADVIRLAIGHYRGRMTEVARRLGIGRSTLYRKLGELGIDQSSAA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgaagcggccagcgcctgctgatggtgatcgacgacgagccggcgcagcggcgg
ctgatcgcggcgatcgccgggcggcgcggatggcggacgatcgctgcgggcgatcccgaa
gtcgcgatcgcgcagctcggcacgcccgacggcatggcgctggatgcgatcctgctcgac
agctggtcgccggatgccgataccgcggcgctgatcggcgagctgcgcagccggcgcccc
gcactccccatcctgatgctgaccgccaacaactcggtcgccgccgcggtccaggcgatg
cgcgcgggcgcgaccgacttcctggtcaagccgctcagccccgaacggctgctgtcggcg
ctcgacgccgcgctcggcgccgccggcacgggcgagctccgcccactgaccgagaagctg
cccgccagcctggcgttcgaggatatcgtgggcgccgcgccgcagttccgcgccgcgctc
gccatcgcggcgaaggccgcgcgcgcgcgcgtgccggtgctgatcgagggcgaaagcggg
gtcggcaaggaagtcgtcgccgacgcgctccacgccgcgtccccgcgcgccaagaaaccg
atgatccgcgtcaattgcggtgcgatccctgcgaacctcgtcgaaagcgagctgttcggg
cacgaaaagggtgccttcaccggcgcgttcgaacgcaagatcgggcgcttcgccgatgcc
gacggcggcaccatcttcctcgacgagatcggcgagatgccgctggaggcgcaggtgaag
ctgctgcgcgtgttgcagtcgggcgagatccagccgatcggcgcgcgccatccccgcgaa
gtcgacgtccgcgtgatcgccgccaccaacaagacgctggccgatgaagtggccggcgga
cgcttccgcgaagacctctattaccggctgaacgtggtgcaggtgacgatcccccccttg
cgcgatcgtccgggcgacatcgctccgctggcgcggcatctgctggggcgggtggcgatg
cagccggggttgcgcccgctcggcatcaccgacgacgcgctgtcgctgctggtcggctac
gactggccgggcaacgtgcgccagttgcagaacgcgctcttccgcgccgcggtgctgtgc
gacggcgatgcactgaccaaggccgatttcccgcagatcgcgacgctcgccggtgcccgc
gccacgcccgccggcagtgccgggtcgatcgtcggggcaagcggcgtcaccctgttccgc
gccgacggcaatctgcgcgcgctggaggagatcgaggccgacgtgatccgcctcgccatc
ggtcactaccgcgggcgcatgaccgaagtcgcgcggcggctggggatcgggcggtcgacc
ctgtaccgcaagctcggcgaactcggcatcgaccaatccagcgcggcgtga
DBGET
integrated database retrieval system
