Sphingomonas donggukensis: M9980_13755
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Entry
M9980_13755 CDS
T08944
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sdon
Sphingomonas donggukensis
Pathway
sdon00300
Lysine biosynthesis
sdon00470
D-Amino acid metabolism
sdon01100
Metabolic pathways
sdon01110
Biosynthesis of secondary metabolites
sdon01120
Microbial metabolism in diverse environments
sdon01230
Biosynthesis of amino acids
Module
sdon_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M9980_13755 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M9980_13755 (lysA)
Enzymes [BR:
sdon01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
M9980_13755 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
URW75570
UniProt:
A0ABY4TT31
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Position
complement(2794907..2796163)
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AA seq
418 aa
AA seq
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MDHFHYRDGELHVEDVPVRVIAEAVGTPVYIYSRGTFARHAQVFREGLEQAGDVHLAYAI
KANPNLAVLRVLANEGYGADVVSGGEMRRAIAAGMPPADIVFSGVGKTEDELVAALEAGI
GQFNLELEEEGHVLARLAAERGLTAPAVLRVNPDVDAGTHAKISTGKAENKFGVAISDAA
GIFARLSGLAGLNLRGVAIHIGSQLQSLAPLERAYARVGELVAELRGAGHTITHVDLGGG
LGVPYRHGDVFPTPAELGAMVARVTKDWGVTLMFEPGRVIAGNAGVLATKVIWVKPGVGD
PWVIVDAAMNDLARPALYDAFHDFAAVRPNGERMTANIAGPVCESGDTFAMHREIDAVAS
GDLAVFRTAGAYGATMASTYNSRALVPEVLVDGDRFAVVADRIDPGTIMAAERVPDWL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaccatttccactaccgcgacggcgaactgcacgtcgaggacgtccccgtccgcgta
atcgcggaagccgtcggcacgccggtgtacatctattcgcgcggcacgttcgcgcggcat
gcgcaggtattccgcgaggggctggagcaggccggcgacgtccacctggcctatgctatc
aaggccaatccgaacctggccgtactgcgcgtgctcgcgaacgaaggctatggcgcggac
gttgtatccgggggcgagatgcgccgcgcgatcgccgccggaatgccgcccgccgacatc
gtgttttcaggggtaggcaagaccgaggacgagctggtcgccgcgctggaggccgggatc
ggccagttcaacctggagctggaggaggagggccatgtcctcgcccgcctcgccgccgaa
cgcgggctgaccgcgccggcagtgctgcgcgtcaatccggacgtcgatgcgggcacccat
gccaagatctcgaccggcaaggccgagaataagttcggcgtcgcgatcagcgatgcggcg
ggcatcttcgcgcggctgtcggggttggcgggcttgaacctgcgcggggtcgcgatccac
atcggcagccagttgcagagccttgcaccgctcgagcgcgcgtacgcgcgcgtcggcgag
ctggtcgccgaactgcgcggcgccggccacacgatcacgcacgtcgatctgggcggcggt
ctcggcgtgccgtaccgccacggcgatgtgttcccgacccccgcggaactcggcgcgatg
gtggcgcgggtgaccaaggactggggcgtcacgctgatgttcgagcccggccgcgtcatc
gccggcaatgcgggcgtgctggcgacgaaggtgatctgggtgaagccgggcgtcggcgac
ccctgggtgatcgtcgatgcggcgatgaacgacctcgcccgtcccgcgctgtacgatgcc
ttccacgatttcgccgccgtgcgccccaatggcgagcggatgaccgcgaacatcgccggg
ccggtgtgcgagagcggcgacaccttcgcgatgcaccgcgagatcgacgcggtggcgtcg
ggcgaccttgcggtgttccgcaccgccggcgcgtacggcgcgacgatggcatcgacctac
aacagccgcgcgctggtgcccgaagtgctggtcgacggcgaccggttcgcggtggtcgcc
gaccgcatcgatccgggcacgatcatggccgcggagcgggtgccggactggctgtga
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