Staphylococcus delphini: NCTC12225_00006
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Entry
NCTC12225_00006 CDS
T06587
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sdp
Staphylococcus delphini
Brite
KEGG Orthology (KO) [BR:
sdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdp03032
]
NCTC12225_00006 (gyrB)
03400 DNA repair and recombination proteins [BR:
sdp03400
]
NCTC12225_00006 (gyrB)
Enzymes [BR:
sdp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NCTC12225_00006 (gyrB)
DNA replication proteins [BR:
sdp03032
]
Prokaryotic type
DNA Topoisomerases
NCTC12225_00006 (gyrB)
DNA repair and recombination proteins [BR:
sdp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC12225_00006 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
TOPRIM_C
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
VED61460
LinkDB
All DBs
Position
1:5121..7043
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AA seq
640 aa
AA seq
DB search
MADVNNSENYGASQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYA
DNIEVVIEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGGLH
GVGSSVVNALSDTLEVYVHRDGRIHHQAYHKGVPAFDLKQVGDTDQTGTVIRFKADGTIF
QETTVYNYETLQKRIRELAFLNKGIRITLTDERDEENVREDSYHYEGGIKSYVELINENK
EPLHDEPIYVHQTRDDIEVEIALQYNSGFATNLLTYANNIHTYEGGTHEDGFKRALTRVL
NNYGTQSKLIKEDKDRLSGEDTREGLTAVVSIKHGDPQFEGQTKTKLGNSEVRQIVDRVF
SELFERFLYEHPQVARIIVEKGIMASRARIAAKKAREVTRRKSALDISSLPGKLADCSSK
DPSESEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDKILNNNEIRQMVTA
FGTGIGGEFDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPL
YKLTQGKQKYYVFNDRELDKLKEKLNPTPKWSIARYKGLGEMNADQLWETTMNPENRAML
QVTLDDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLDF
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
ttggctgatgtgaacaactcagaaaactatggcgcaagtcagattcaagtattggaaggt
cttgaagcggtacgtaagcgaccaggtatgtatattggttcaacttcagaacgcggtctg
catcatctcgtttgggaaattgtcgataacagtattgacgaagcacttgcaggatatgct
gataacatagaagtagtcattgagaaggataattggattaaagttacggataatggacgt
gggattccagttgatattcaagaaaaaatgggacgtcctgcagttgaagtgattttaaca
gtattacacgctggtggtaagttcggcggcggtggatacaaagtttcaggtggtttacac
ggtgtgggctcatcagtagtaaacgccttaagtgacacattagaagtttatgtgcacaga
gacggtcgtattcatcatcaagcgtaccataaaggtgtccctgcttttgatttaaaacaa
gtgggcgatacagatcaaacgggaacagtcatccgtttcaaagcggacggtacgattttc
caagagacaaccgtttataactatgaaacgttgcaaaaacgtattcgtgaattggcattt
ttaaataaaggcatccgtattacgctcacagacgaacgtgacgaagaaaacgtgcgtgag
gatagttatcactatgaaggtggaattaagtcgtatgtggagcttataaacgaaaataaa
gagcctttacatgatgagccgatttatgtgcaccaaacacgtgacgacattgaagtggaa
attgcactacaatacaacagtggttttgcgacaaatctactaacatatgcgaacaacatt
catacgtatgaaggtgggacgcacgaagacggctttaaacgtgcattgacaagagtgttg
aacaattatggtacacaaagcaagttaattaaagaagataaggatcgtttatcaggtgaa
gatacacgcgaaggcttaacagcagtcgtgtcgattaaacatggtgatccacaattcgaa
ggtcaaacgaaaacaaaattaggtaactctgaagtccgtcaaattgttgaccgtgtcttc
tcagagctttttgagcgctttttatatgaacatcctcaagtggcacgcatcatcgtagaa
aaagggattatggcatcacgcgcacgtattgctgctaaaaaagcacgtgaagtaacgcgc
cgtaaatctgctttggacatttcaagtttgccaggtaaattagcggactgttcaagtaaa
gatccgtctgaaagtgagattttcttagtagagggtgactctgccggggggtctacaaaa
tcaggtcgtgactcacgtacacaagcgattttaccgttgcgtggtaaaattttaaacgtt
gaaaaagcacgcttagataaaattttaaacaacaatgaaattcgtcaaatggtaactgca
tttggtacaggtattggcggcgaattcgatatttcgaaagcacgctaccataagattgtc
attatgaccgatgcggatgtcgatggtgcgcatattcgtacgttattactcacattcttc
tatcgctttatgcgtccgttgattgaagcgggttacgtgtatattgcacagccaccgttg
tacaagctgacgcaaggtaaacaaaagtattatgtgtttaatgatcgtgagcttgataaa
ttaaaagaaaaactgaatcctacgccaaaatggtctattgcacgctataaaggtttaggt
gagatgaatgcggatcagttatgggagacaacaatgaatccagaaaaccgagcgatgttg
caagtgacgttggatgatgcgattgaagcagaccaaacttttgaaatgttaatgggcgat
gtcgttgaaaatcgtcgtcagttcattgaagataacgccgtatatgcgaacctggatttc
tag
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