Staphylococcus delphini: NCTC12225_00587
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Entry
NCTC12225_00587 CDS
T06587
Symbol
fdhA
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
sdp
Staphylococcus delphini
Pathway
sdp00630
Glyoxylate and dicarboxylate metabolism
sdp00680
Methane metabolism
sdp01100
Metabolic pathways
sdp01120
Microbial metabolism in diverse environments
sdp01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sdp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NCTC12225_00587 (fdhA)
09102 Energy metabolism
00680 Methane metabolism
NCTC12225_00587 (fdhA)
Enzymes [BR:
sdp01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
NCTC12225_00587 (fdhA)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer2_4
Fer4_7
Fer4
NADH-G_4Fe-4S_3
Fer4_10
Fer4_6
Fer4_21
Fer4_2
Fer4_8
Fer4_15
Fer4_9
Fer2_3
HupH_C
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
VED62031
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All DBs
Position
1:660031..662967
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AA seq
978 aa
AA seq
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MQEHLIVTLDGKDYLVEPGKNLLEFIKEQQTFVPSICYNESLGPIQTCDTCAVEIDGKIE
RACGTTVQRSMVVNTTTQPVQDSQKEALDRILEKHQLYCTVCDYNNGNCEIHNTMDQWGL
EHQTYEYKPKPYEVDFGPFYRYDPNQCILCGRCVEVCQDVQVNETLSIDWDREHPRVIWD
NDVSINDSSCVGCGQCATVCPCNAMMENNMVGNAGYMTDIEPGSLASMIDLTKKAETGYG
PLFAVSDSEAAMREERIKKTKTVCTYCGVGCSFEVWTKDREILKVQPSHDSPANKISSCV
KGKFGWDYVNSEERLTKPLIRRGDQFEEVEWDEAIKHVATRMQEIKAQFGPDALSFISSS
KATNEESYLMQKLARQVIGTNNIDNCSRYCQAPATKGLFRTVGHGGDSGSIEDIASADMV
ITIGTNTAEAHPVIASRIKRSHKLFGTKLHVFDIRKHEMAQRADEFYQPYPGTDLVWLSA
VTKYIIDQGWHAQSFIDEWVDHFDEYYQSLEPYTMDFAEEHTGISKERLIHLAKEIVSVN
SVSICWAMGVTQQETGSDTSTAISNLLLATGNYMKPGAGSYPLRGHNNVQGCSDFGSMPD
KLPGYQSVEDDEARGRYEADWGVKLPSHPGYDNHQMMDHIHAGDVHSLFILGEDTGIVDS
NINYVQAALEKVDFLVVQDEFLTFTAEYADVILPASPSLEKDGTFTNTERRFQRLYQVLE
PLGDSKPDWQITQMIAKELGFDWGYKHPAEIMDEASDLTPMFAGVKYHRLEGYNSLQWPV
AADGTDSPLLFTERFNFDNGKAKFFALDFNNFYKTNETYDLHVNNGRVLEHFHEGNMTYK
VPGLKYKMPTAFVEVSPELAKERGIHEGAAVKLISEHGEATMHVHITERVSGKQIYLPLN
DNSAAAINYLTSSLTDPETHTPAYKSTSCRMEILSKRGKSPLNPTNFRNQTRNPQYSVRV
DKKWARPDYVFPGDQVMK
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaacatcttattgtaactttagatggtaaagattatcttgtagaaccgggcaaa
aatttgcttgaattcataaaagagcaacaaacgtttgtaccctcgatttgttataacgaa
tcattaggacctattcaaacatgtgatacctgtgccgttgaaattgacggtaaaatcgaa
cgtgcatgtgggacgacggtacaacgctcaatggttgtgaacacgacaacacaaccggta
caagatagccaaaaggaagcattagatcgcattttagaaaaacaccaactttattgtaca
gtctgtgattacaataacggtaactgtgaaattcataatacgatggaccaatggggattg
gaacatcaaacgtatgaatataaaccgaaaccgtatgaagtggattttggtccgttttat
cgttatgatccgaaccaatgcattttatgtggacgttgtgtcgaagtgtgtcaagacgtt
caagtgaatgaaacattgtccattgactgggaccgtgaacatccacgtgtcatttgggat
aacgacgtctcaattaatgactcttcatgtgtcggctgtggtcaatgtgcaacagtgtgt
ccatgcaatgcgatgatggaaaacaacatggtcggtaatgcaggctacatgacagacatc
gagccaggctcacttgcttcgatgattgatttaacgaagaaagcagaaacaggctacggt
cctttatttgcagtgtctgattccgaagcggctatgcgtgaagaacgtattaaaaagacg
aaaaccgtatgtacatattgtggtgtcggttgtagtttcgaagtatggacgaaagaccgt
gaaatcttaaaagtgcaaccttctcacgattcaccagcaaacaaaatttcttcatgtgtg
aaagggaaattcggttgggattacgtcaattcagaagagcgtttaacgaaaccactcatt
cgccgtggtgatcaatttgaagaagttgaatgggatgaagcgattaaacatgtggcgaca
cgtatgcaagaaattaaagcgcaattcggtccagatgcattgtcattcatttcatcttcc
aaagcgacaaatgaagaatcctacttaatgcaaaaacttgcacgtcaagtcattggtacg
aacaatatcgacaactgttcaagatattgccaagcaccagcgacaaaaggtttattccgc
acggtcggtcatggtggggattcaggttcaattgaagatattgcgagtgcagacatggtc
attacgattggtacgaatacagcagaagcgcatccagttatcgcatctcgcattaaacgt
tcccacaaattattcggtactaaattgcatgtattcgacatccgtaaacatgaaatggca
cagcgcgcagatgaattttatcaaccttatccaggtacggatttagtatggttatctgct
gtgacgaaatacatcattgatcaaggatggcatgcacagtcatttattgatgaatgggtc
gaccattttgatgaatactatcaatcactcgaaccgtatacaatggactttgcagaagaa
catacaggcatttcaaaagaacgcctcatccaccttgctaaagaaattgtgagtgtcaat
tcagtttcaatttgttgggcgatgggtgtgacacaacaagaaactggttcagatacaagt
acagcgatttctaacttgttattagcaacagggaactatatgaaaccaggcgcagggtca
tacccattacgtggccataataacgttcaaggctgttctgactttggtagtatgccggat
aaattacctgggtaccaaagtgttgaagatgatgaagcacgtgggcgttatgaagcagat
tggggtgtgaaattaccaagtcatccaggttacgacaaccaccaaatgatggatcatatt
catgcaggtgacgtacacagtttattcattttaggggaagatactggcattgtggactca
aacattaactatgttcaagccgcacttgaaaaagtagacttccttgtcgttcaagatgaa
tttttaacatttacagctgaatatgcagacgtgattttacctgcaagtccgtcactagaa
aaagatggtacattcacaaacactgagcgtcgtttccaacgtttatatcaagtgttagaa
ccgcttggtgactctaaaccagactggcaaattacacaaatgattgcaaaagaacttggc
tttgattggggttacaaacacccagctgaaattatggatgaagcatcagacctaacacct
atgtttgctggtgtgaaatatcatcgtttagaaggctataacagcttacaatggccagtc
gctgcagatggtaccgattcaccattattgtttacagaacgttttaactttgataatggt
aaggcgaaattctttgcactcgatttcaataacttctataaaacgaatgaaacgtatgac
ttacatgtgaacaatggtcgtgtcctcgaacatttccatgaaggtaacatgacatacaaa
gtaccaggattaaaatacaaaatgccgacagcgtttgttgaagtatcgccggaattggca
aaagaacgtggtatccatgaaggggcagcagttaaattaatttctgaacatggtgaagcg
acaatgcacgtgcacattacagaacgcgtgtctggtaaacaaatttatttaccgttgaat
gacaacagtgcagcagcgattaactatttaacaagtagtttgacagacccagaaacacat
acaccggcttataaatctacaagctgtcgtatggaaatcttgagtaagcgcggaaaatca
ccgcttaacccaaccaacttccgcaatcaaacaagaaatccacagtatagcgtgcgtgtt
gataaaaaatgggcaagaccggattacgtctttccaggggatcaggtgatgaaataa
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