Staphylococcus delphini: NCTC12225_00680
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Entry
NCTC12225_00680 CDS
T06587
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sdp
Staphylococcus delphini
Brite
KEGG Orthology (KO) [BR:
sdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdp03016
]
NCTC12225_00680 (truA)
Enzymes [BR:
sdp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
NCTC12225_00680 (truA)
Transfer RNA biogenesis [BR:
sdp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC12225_00680 (truA)
Prokaryotic type
NCTC12225_00680 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DUF5530
Motif
Other DBs
NCBI-ProteinID:
VED62124
LinkDB
All DBs
Position
1:741736..742539
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AA seq
267 aa
AA seq
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MQRVLVKISYNGAQFLGFQIQNQGRTVQGYFEKILKRMHQQHVRIHPSSRTDRGVHAKAQ
YFHFDTHLNITPERWQHAMNSALPDDIYVHDVSFIDQDFHCRYDCVGKRYRYSIYQADHR
NPFWSQLKTFEPKALDIEAMQRAAKYFVGTHDFTTFCSQKTEVESKERTIYESRIEQTED
GIDFVITGSGFLYNMVRVIMAYLLEVGKGKRSADDVPNLLAQQDRNLVPHTAPAEGLYLE
KIYLAPEQLTADFGDDIQIHYKKSTQI
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgtgtcctcgttaaaatcagttataacggtgcacaatttttaggatttcaaatt
caaaatcaagggcgaacagttcaaggctactttgaaaaaatattaaaacgcatgcatcaa
caacatgtacgcattcatccatccagtcgaacggaccgtggtgtacatgctaaagcacaa
tattttcattttgatacgcatttaaacattacgccagaacgttggcaacatgcgatgaac
agtgcattgcctgatgatatttatgttcatgacgtttcttttattgatcaagattttcat
tgtcgctatgactgtgtggggaagcgctatcgatatagtatttatcaagctgaccatcgc
aatccgttttggtcacagttgaagacctttgagcctaaagcattggatattgaagcgatg
caacgtgcggcaaagtatttcgttggtacgcatgattttacgacgttctgttcgcaaaaa
acagaagttgaaagtaaagaacgcacgatatatgaaagtcgtattgaacaaactgaggac
ggtatcgatttcgtgattactggatcaggatttttgtacaatatggtgcgtgtcattatg
gcgtatttattagaagtcggcaaagggaaacgttcagcagacgacgtaccaaacttgtta
gcccagcaagatagaaatctcgttccgcatacagcacccgcagaaggactgtatttggag
aagatttatttagcgccagagcagttaacagcggactttggagatgacattcaaattcac
tataaaaaatcaacacaaatttaa
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