Staphylococcus delphini: NCTC12225_01121
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Entry
NCTC12225_01121 CDS
T06587
Symbol
dnaE_1
Name
(GenBank) DNA polymerase III, alpha subunit, truncation
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sdp
Staphylococcus delphini
Pathway
sdp03030
DNA replication
sdp03430
Mismatch repair
sdp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC12225_01121 (dnaE_1)
03430 Mismatch repair
NCTC12225_01121 (dnaE_1)
03440 Homologous recombination
NCTC12225_01121 (dnaE_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdp03032
]
NCTC12225_01121 (dnaE_1)
03400 DNA repair and recombination proteins [BR:
sdp03400
]
NCTC12225_01121 (dnaE_1)
Enzymes [BR:
sdp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC12225_01121 (dnaE_1)
DNA replication proteins [BR:
sdp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC12225_01121 (dnaE_1)
DNA repair and recombination proteins [BR:
sdp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC12225_01121 (dnaE_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHP
DNA_pol3_alpha
SANT_DAMP1_like
Motif
Other DBs
NCBI-ProteinID:
VED62516
LinkDB
All DBs
Position
1:1150137..1151627
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AA seq
496 aa
AA seq
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MAERNEYVLHHNHSYYSNLRLTDAITSPRQLIETAKQYGYKGMSITEHESLSSAVDMIKT
VKEMKASGELREDFRMLLGNEIYLVDSLEEVRDNYESGKTKFPHFCLIAKNRKGFEALSK
LSSQAWKNSFFSSSIMERVPTEKAYLREVAQSDEYKGTLMASSACLGSPICLYLQEKMLM
EQTFDKEKIQEAHNKAKNEVQWCVDTFGKDDFYIELQPADTPVQRYVNENLLEFVKEFDL
KYIVACDTHYANKSHATIHAAFLNSKNEEREVEEFYKYTYMHSVDDIYKQMAYYLGEDVV
KQALETTTELYDKSEDYDLAHSPIIPRAEIPEFELKHLFQPAYDKYKSLERLAYSDKKDE
RYMLHLLEEGYLRELHKEDITKEEFHQILARLDVEMEEILGVGDKINQTVSSYYITVRDI
INTIWEEDTCNGYSGSLVGSGRGSSGGFLSLFLLGITQVNPLEHKNMPHFRHLHKSRQDF
PKLLGIKCERKTKRCA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaagaaacgaatatgtactacaccataaccattcatattactctaacttgcgt
ttaacagatgcgattacttcaccaagacaattaatcgagacagccaaacaatatggttat
aaaggtatgagtattactgaacatgaatcactttctagcgctgtcgatatgattaaaaca
gtgaaagagatgaaagctagtggagaattacgagaagattttagaatgctgttgggcaat
gaaatctatctcgttgatagcttggaagaggttagagacaactatgaaagcggaaaaaca
aaattcccacatttttgtttaattgcaaagaatagaaaaggttttgaagcattaagtaaa
ttaagctcacaagcgtggaagaattcgttttttagtagttctattatggaacgtgttcca
actgaaaaagcatatttaagagaagtagcgcagtcagatgagtataaaggaacattgatg
gcaagcagcgcatgtcttggaagcccaatctgcttatatttacaagaaaaaatgcttatg
gaacaaacttttgataaagaaaagattcaagaagcacacaacaaagctaaaaatgaagtt
caatggtgtgttgatacatttggtaaagacgatttttacattgaattacagccagcggat
acacccgtgcaacgttatgttaatgaaaacttattagagtttgttaaagaatttgattta
aaatatatagttgcttgtgacacacattacgccaacaagtctcatgctacaattcatgct
gcatttctcaactctaaaaatgaagagcgtgaggtagaagagttctataagtatacatat
atgcatagtgtagacgatatttataaacaaatggcttactatttaggtgaagacgtggtc
aaacaagcgctagaaactacaacggaattatacgataaatcagaggattatgacttagcc
cattcaccaattattccacgagccgagattcctgaatttgagttaaagcacttgtttcag
cccgcttatgacaaatataagagtcttgaaagattagcgtattctgataagaaagacgaa
agatatatgcttcatttgttagaggaaggttatctgagggagctacacaaagaagatata
actaaagaagagtttcatcaaatattagcaaggctagatgttgaaatggaagagatttta
ggtgtaggagataagattaatcaaacagtaagctcatactatattactgtgcgtgatata
atcaacacaatttgggaagaagatacttgtaacggatattctggttcattagttggcagt
ggacgtgggtcatctggtggtttcttatcattgttcttacttggaattactcaagttaat
ccattagaacataaaaatatgccacatttcagacatttgcataaaagtcgtcaagatttc
cctaaattattggggattaaatgtgaacgcaagacaaagcggtgtgcttag
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