Staphylococcus delphini: NCTC12225_01165
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Entry
NCTC12225_01165 CDS
T06587
Symbol
cbf1
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
sdp
Staphylococcus delphini
Brite
KEGG Orthology (KO) [BR:
sdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdp03019
]
NCTC12225_01165 (cbf1)
Messenger RNA biogenesis [BR:
sdp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC12225_01165 (cbf1)
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
VED62560
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All DBs
Position
1:1182415..1183356
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AA seq
313 aa
AA seq
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MRNIEKLQPGDTVDHFFLIHRATQGVTAQGKDYMTLHLQDKSGEVEAKVWTITKEGMNQL
KPERIVHIKGDMINYRGRKQMKVNQFRLATEEDGLRTQDFIDGAPMSPEEIKDAMQDYIF
EIENAPLQRVTRYLLNKHEESYFVYPAASTHHHNFVSGLSYHVLTMLEIARQLCIIYPEL
NKSLLYSGIILHDMGKVRELSGPIATSYTLEGNLLGHISIASDEVADAARELNVDGEEIL
LLRHLILSHHGKLEYGSPKLPYVKEAEILNFIDNIDARMNMFEKAFKKIDKGQFTERIFG
LEGRQFYKPEKLD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatattgaaaagctacaacctggagacacggtggatcacttctttctcatccat
cgtgcgactcaaggcgtaactgcgcaaggtaaagattatatgacgcttcatttacaagat
aaaagtggtgaagtagaagcgaaagtttggaccattacaaaagaaggtatgaaccaatta
aagcctgaacgcattgtccacattaaaggcgatatgatcaattaccgcggtcgcaaacaa
atgaaagtcaatcaatttcgacttgcgactgaagaagacgggttacgtacgcaagacttt
attgatggggcaccgatgtctcctgaagaaatcaaggatgcgatgcaagattacattttc
gaaattgaaaacgcaccgctacaacgtgtgacgcgttatttactaaataaacatgaagag
agttatttcgtttatccagcagcaagtacgcatcaccacaactttgtcagtggtttaagt
tatcacgttttaacgatgttagaaattgcccgtcaattatgtatcatttatccagaactg
aacaaaagtttgttgtacagcggtattattttacatgacatgggtaaggtgagagagctg
tccggtccgattgcgacatcatatacattggaagggaatttactcgggcatatttcaatc
gctagtgatgaagtggcagatgcagcgcgtgagttaaatgtagatggtgaagagattttg
ttactccgtcatctcattttgtcacatcacggtaagttggaatatggctcaccgaaactg
ccttatgtgaaagaagcggaaattttaaactttattgataacattgatgcacgtatgaat
atgttcgaaaaagcgtttaagaagattgataaaggtcaattcacggagcgcattttcggc
ttagaagggcgtcaattttataaacctgaaaagttggattaa
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