Staphylococcus delphini: NCTC12225_01450
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Entry
NCTC12225_01450 CDS
T06587
Symbol
nfo
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
sdp
Staphylococcus delphini
Pathway
sdp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC12225_01450 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdp03400
]
NCTC12225_01450 (nfo)
Enzymes [BR:
sdp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
NCTC12225_01450 (nfo)
DNA repair and recombination proteins [BR:
sdp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NCTC12225_01450 (nfo)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DASH_Dad1
OST3_OST6
AcMNPV_Orf101
Motif
Other DBs
NCBI-ProteinID:
VED62824
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All DBs
Position
1:1457308..1458201
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AA seq
297 aa
AA seq
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MLIGSHVSMSGKKMLEASAEEAHQYGASTFMIYTGAPQNTRRKAIEDLNIEAGHKAMERY
NLSNIVVHAPYIINIANTQKPEVFELGVNFLQNEIERTEALGAKDIVLHPGAHVGAGAEV
GIKRIIEGLNEVLTNQNDVRIALETMAGKGSEIGRTFEEIAQIIDGVTNNERLSVCLDTC
HIHDAGYDVVNDFDSVLNEFDRIIGVDRIKVVHVNDSKNPISAHKDRHENIGFGHIGFDA
LNYVVHHEQFKNIPKILETPYVGEDKKNKKPPYRYEIEAFKNETFDPEMKNKIISQA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgttaatcggatcacatgtgtctatgagtggtaaaaaaatgttagaagcatcagcagaa
gaagcacatcaatacggtgcttcaacatttatgatttatacaggtgcacctcaaaacaca
cgtcgtaaagcgattgaggacctgaatatcgaagcaggccataaagcgatggaacgttac
aatctttctaatattgtcgtgcatgcgccttatattattaatatcgcgaatacgcaaaag
ccagaagtgtttgaattaggtgttaactttctacaaaatgaaattgaacgaactgaagca
cttggtgcgaaagatattgtgttacatccaggtgcgcatgtcggtgctggtgctgaagta
ggtattaagcgtattatcgaagggttaaatgaagttttaacgaatcaaaacgatgtcaga
attgcattagaaacgatggcaggtaaaggttcagaaatcggtagaacttttgaagaaatc
gcacaaattatcgatggcgttaccaataatgaacgcttatctgtttgtctcgatacgtgt
catattcacgatgcgggctatgatgtcgtcaatgattttgatagtgttttaaacgaattc
gaccgtattattggtgtcgaccgtattaaagttgtccacgttaacgatagtaaaaatccg
atatcagcacataaagaccgtcatgaaaatatcggttttggacatatcggatttgatgca
ttaaattacgtggtacatcatgaacaatttaaaaatatccctaaaattttagaaacacca
tacgtcggtgaagacaagaaaaataaaaagccaccgtatcgttatgagattgaagcattc
aaaaatgaaacgtttgatccagaaatgaaaaacaaaattatatcacaagcataa
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