Staphylococcus delphini: NCTC12225_01497
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Entry
NCTC12225_01497 CDS
T06587
Symbol
pdhD_1
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
sdp
Staphylococcus delphini
Pathway
sdp00010
Glycolysis / Gluconeogenesis
sdp00020
Citrate cycle (TCA cycle)
sdp00260
Glycine, serine and threonine metabolism
sdp00280
Valine, leucine and isoleucine degradation
sdp00310
Lysine degradation
sdp00380
Tryptophan metabolism
sdp00620
Pyruvate metabolism
sdp00630
Glyoxylate and dicarboxylate metabolism
sdp00640
Propanoate metabolism
sdp00670
One carbon pool by folate
sdp00785
Lipoic acid metabolism
sdp01100
Metabolic pathways
sdp01110
Biosynthesis of secondary metabolites
sdp01120
Microbial metabolism in diverse environments
sdp01200
Carbon metabolism
sdp01210
2-Oxocarboxylic acid metabolism
sdp01240
Biosynthesis of cofactors
Module
sdp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sdp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sdp_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
sdp_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sdp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
NCTC12225_01497 (pdhD_1)
00020 Citrate cycle (TCA cycle)
NCTC12225_01497 (pdhD_1)
00620 Pyruvate metabolism
NCTC12225_01497 (pdhD_1)
00630 Glyoxylate and dicarboxylate metabolism
NCTC12225_01497 (pdhD_1)
00640 Propanoate metabolism
NCTC12225_01497 (pdhD_1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NCTC12225_01497 (pdhD_1)
00280 Valine, leucine and isoleucine degradation
NCTC12225_01497 (pdhD_1)
00310 Lysine degradation
NCTC12225_01497 (pdhD_1)
00380 Tryptophan metabolism
NCTC12225_01497 (pdhD_1)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NCTC12225_01497 (pdhD_1)
00670 One carbon pool by folate
NCTC12225_01497 (pdhD_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdp04147
]
NCTC12225_01497 (pdhD_1)
Enzymes [BR:
sdp01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
NCTC12225_01497 (pdhD_1)
Exosome [BR:
sdp04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
NCTC12225_01497 (pdhD_1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
DAO
AlaDh_PNT_C
NAD_binding_8
HI0933_like
FAD_oxidored
FAD_binding_2
GIDA
3HCDH_N
FAD_binding_3
Lycopene_cycl
Thi4
Trp_halogenase
2-Hacid_dh_C
UDPG_MGDP_dh_N
Lys_Orn_oxgnase
Motif
Other DBs
NCBI-ProteinID:
VED62870
LinkDB
All DBs
Position
1:1499516..1500934
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AA seq
472 aa
AA seq
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MTKEKYDIVILGGGIAGYSAAIRASQLGKSVAIVEKSKMGGTCLHQGCIPTKSFLKSAEV
FQYIQHADDFGVTAEPPTLNFAKVMERKNRIVDTMYQGVQGLMKRHKIDVFHGVGRLMGA
SIFTPQSGTVSVEYEDGTSELLPNDYVLIATGSKPMALPFLPFDQQQIYSSNDMMTLETL
PQSITIIGGGVIGLEFASFFSSVGVTVHIIEAGPRILPTESAQISQLIQKQLEEKGVNFH
INTALKADDIQQSDEEVTFNLEMPFSTEKVLVAIGRQVNTSDLGLDNTKVVLNDKQMIET
NEFMQTADTHIYAAGDVIGHLQLAHVGAREGVIAVEHMFNENPLPVDYDSMPRCVYTSPE
IASIGVNQETAKQRGLKFEVMKAPFKANGKATITASSTPEGFAELLFDQASGSLIGASLI
GPHVTELINELSVLQFMNGSALELGLSTHAHPSISELLMELGLKSNHQSIHI
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaaaaatacgatatcgttatccttggcggtggtattgcaggatattctgct
gcaattcgcgcgagtcaacttggaaaatctgttgctatagttgaaaaatcaaaaatgggt
ggaacatgtctgcatcaaggctgtatcccaacaaaatcttttctcaaatcagcggaagtg
ttccaatacatacaacatgctgatgactttggtgtgaccgctgaaccaccgacgcttaat
ttcgcaaaagtgatggaacgtaaaaatcgcattgtcgacacgatgtatcaaggggtccaa
gggctaatgaagcgtcataaaatcgatgtatttcatggcgttggtcgcttaatgggtgct
tcaattttcacacctcaaagtggcacagtatctgtagagtatgaagacggcacatctgaa
ctattaccgaatgactatgtgttaattgcgacaggatccaaacctatggcactgccgttt
ttaccgtttgatcaacaacaaatctatagtagtaatgatatgatgacacttgaaacttta
ccacaatccatcacaattattggtggcggtgtcatcggcttagaatttgcgtctttcttt
agtagtgtaggtgtcacggtacatattatcgaagctgggccacgaattttaccgacagaa
agtgcacaaatcagccaattaattcaaaaacaattggaagagaaaggtgtcaacttccat
atcaatacagcgcttaaagcagacgacatccaacaaagcgatgaggaagtaaccttcaat
cttgaaatgccattctccactgaaaaagtgctcgttgccattggtcgacaagtgaatacg
tctgatttaggtttagacaatacgaaagttgtattaaatgacaaacaaatgattgaaacg
aatgaatttatgcaaacggctgatacacatatttatgctgctggagatgtaatcggccat
ctacaacttgcacatgtcggagctagagaaggtgtgattgccgttgaacatatgtttaac
gaaaatccactgcccgttgattatgattcgatgccaagatgtgtttatacatcacctgaa
attgcgtctatcggtgtcaatcaagaaacggcaaaacaacgcggtcttaaatttgaagtt
atgaaagcaccgtttaaagcaaatggtaaagcaacaattacagcttcatcaacacctgaa
ggctttgctgaattattgtttgatcaagcatctggtagtttgatcggtgcatctttaatt
ggtcctcatgtcacagagctcatcaacgaattaagcgttttacaatttatgaatggttct
gcacttgaattaggactttcaacacacgcacatccgtccatttcagaattactcatggaa
ttaggattaaaatctaatcatcaatctattcacatatag
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