KEGG   Staphylococcus delphini: NCTC12225_01497
Entry
NCTC12225_01497   CDS       T06587                                 
Symbol
pdhD_1
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sdp  Staphylococcus delphini
Pathway
sdp00010  Glycolysis / Gluconeogenesis
sdp00020  Citrate cycle (TCA cycle)
sdp00260  Glycine, serine and threonine metabolism
sdp00280  Valine, leucine and isoleucine degradation
sdp00310  Lysine degradation
sdp00380  Tryptophan metabolism
sdp00620  Pyruvate metabolism
sdp00630  Glyoxylate and dicarboxylate metabolism
sdp00640  Propanoate metabolism
sdp00670  One carbon pool by folate
sdp00785  Lipoic acid metabolism
sdp01100  Metabolic pathways
sdp01110  Biosynthesis of secondary metabolites
sdp01120  Microbial metabolism in diverse environments
sdp01200  Carbon metabolism
sdp01210  2-Oxocarboxylic acid metabolism
sdp01240  Biosynthesis of cofactors
Module
sdp_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sdp_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sdp_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sdp_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sdp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    NCTC12225_01497 (pdhD_1)
   00020 Citrate cycle (TCA cycle)
    NCTC12225_01497 (pdhD_1)
   00620 Pyruvate metabolism
    NCTC12225_01497 (pdhD_1)
   00630 Glyoxylate and dicarboxylate metabolism
    NCTC12225_01497 (pdhD_1)
   00640 Propanoate metabolism
    NCTC12225_01497 (pdhD_1)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    NCTC12225_01497 (pdhD_1)
   00280 Valine, leucine and isoleucine degradation
    NCTC12225_01497 (pdhD_1)
   00310 Lysine degradation
    NCTC12225_01497 (pdhD_1)
   00380 Tryptophan metabolism
    NCTC12225_01497 (pdhD_1)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    NCTC12225_01497 (pdhD_1)
   00670 One carbon pool by folate
    NCTC12225_01497 (pdhD_1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sdp04147]
    NCTC12225_01497 (pdhD_1)
Enzymes [BR:sdp01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     NCTC12225_01497 (pdhD_1)
Exosome [BR:sdp04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   NCTC12225_01497 (pdhD_1)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 DAO AlaDh_PNT_C NAD_binding_8 HI0933_like FAD_oxidored FAD_binding_2 GIDA 3HCDH_N FAD_binding_3 Lycopene_cycl Thi4 Trp_halogenase 2-Hacid_dh_C UDPG_MGDP_dh_N Lys_Orn_oxgnase
Other DBs
NCBI-ProteinID: VED62870
LinkDB
Position
1:1499516..1500934
AA seq 472 aa
MTKEKYDIVILGGGIAGYSAAIRASQLGKSVAIVEKSKMGGTCLHQGCIPTKSFLKSAEV
FQYIQHADDFGVTAEPPTLNFAKVMERKNRIVDTMYQGVQGLMKRHKIDVFHGVGRLMGA
SIFTPQSGTVSVEYEDGTSELLPNDYVLIATGSKPMALPFLPFDQQQIYSSNDMMTLETL
PQSITIIGGGVIGLEFASFFSSVGVTVHIIEAGPRILPTESAQISQLIQKQLEEKGVNFH
INTALKADDIQQSDEEVTFNLEMPFSTEKVLVAIGRQVNTSDLGLDNTKVVLNDKQMIET
NEFMQTADTHIYAAGDVIGHLQLAHVGAREGVIAVEHMFNENPLPVDYDSMPRCVYTSPE
IASIGVNQETAKQRGLKFEVMKAPFKANGKATITASSTPEGFAELLFDQASGSLIGASLI
GPHVTELINELSVLQFMNGSALELGLSTHAHPSISELLMELGLKSNHQSIHI
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgacaaaagaaaaatacgatatcgttatccttggcggtggtattgcaggatattctgct
gcaattcgcgcgagtcaacttggaaaatctgttgctatagttgaaaaatcaaaaatgggt
ggaacatgtctgcatcaaggctgtatcccaacaaaatcttttctcaaatcagcggaagtg
ttccaatacatacaacatgctgatgactttggtgtgaccgctgaaccaccgacgcttaat
ttcgcaaaagtgatggaacgtaaaaatcgcattgtcgacacgatgtatcaaggggtccaa
gggctaatgaagcgtcataaaatcgatgtatttcatggcgttggtcgcttaatgggtgct
tcaattttcacacctcaaagtggcacagtatctgtagagtatgaagacggcacatctgaa
ctattaccgaatgactatgtgttaattgcgacaggatccaaacctatggcactgccgttt
ttaccgtttgatcaacaacaaatctatagtagtaatgatatgatgacacttgaaacttta
ccacaatccatcacaattattggtggcggtgtcatcggcttagaatttgcgtctttcttt
agtagtgtaggtgtcacggtacatattatcgaagctgggccacgaattttaccgacagaa
agtgcacaaatcagccaattaattcaaaaacaattggaagagaaaggtgtcaacttccat
atcaatacagcgcttaaagcagacgacatccaacaaagcgatgaggaagtaaccttcaat
cttgaaatgccattctccactgaaaaagtgctcgttgccattggtcgacaagtgaatacg
tctgatttaggtttagacaatacgaaagttgtattaaatgacaaacaaatgattgaaacg
aatgaatttatgcaaacggctgatacacatatttatgctgctggagatgtaatcggccat
ctacaacttgcacatgtcggagctagagaaggtgtgattgccgttgaacatatgtttaac
gaaaatccactgcccgttgattatgattcgatgccaagatgtgtttatacatcacctgaa
attgcgtctatcggtgtcaatcaagaaacggcaaaacaacgcggtcttaaatttgaagtt
atgaaagcaccgtttaaagcaaatggtaaagcaacaattacagcttcatcaacacctgaa
ggctttgctgaattattgtttgatcaagcatctggtagtttgatcggtgcatctttaatt
ggtcctcatgtcacagagctcatcaacgaattaagcgttttacaatttatgaatggttct
gcacttgaattaggactttcaacacacgcacatccgtccatttcagaattactcatggaa
ttaggattaaaatctaatcatcaatctattcacatatag

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