Staphylococcus delphini: NCTC12225_01766
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Entry
NCTC12225_01766 CDS
T06587
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sdp
Staphylococcus delphini
Brite
KEGG Orthology (KO) [BR:
sdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdp03032
]
NCTC12225_01766 (topA)
03400 DNA repair and recombination proteins [BR:
sdp03400
]
NCTC12225_01766 (topA)
Enzymes [BR:
sdp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC12225_01766 (topA)
DNA replication proteins [BR:
sdp03032
]
Prokaryotic type
DNA Topoisomerases
NCTC12225_01766 (topA)
DNA repair and recombination proteins [BR:
sdp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC12225_01766 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_2
Cys_rich_CPXG
Stap_Strp_tox_C
Motif
Other DBs
NCBI-ProteinID:
VED63132
LinkDB
All DBs
Position
1:complement(1798585..1800654)
Genome browser
AA seq
689 aa
AA seq
DB search
MADNLVIVESPAKAKTIEKYLGKKYKVIASMGHVRDLPRSQMGVDVEHDYEPKYITIRGK
GPVVKDLKRHAKKAKKVFLASDPDREGEAIAWHLANILELEDSKENRVVFNEITKDAVKE
SFKHPRGIEMDLVDAQQARRVLDRLVGYNISPVLWKKVKKGLSAGRVQSVALRLVIDREN
EIRNFKPEEYWSIEGEFRYGKSKFNAKFLHYKDKPFKLATKDDVTVITKALDGNQFTVSN
VTKKEKTRKPANPFTTSTLQQEAARKLNFKARKTMMVAQQLYEGIDLKRKGTIGLITYMR
TDSTRISKDAQNEAKQYIESEYGSEYLSKVTKKGKQGDQDAHEAIRPTSTLRTPAEMKDY
LTRDQYRLYKLIWERFVASQMAPAILDTVAVDLTQNDVKFRANGQTIKFKGFMTLYVETD
DDKGKEKENRLPKLEVGNEVLATKIDPAQHFTQPPPRYTEARLVKTLEELKIGRPSTYAP
TIDTIQKRNYVKNESKRFVPTELGEIVHEQVKEYFPEIIDVDFTVNMETLLDKIADGDVA
WKKVVGDFFNSFKQDVERAEEEMEKVEIKDEPAGEDCEVCGNPMVIKMGRYGKFMACSNF
PDCRNTKAITKPIGVTCPKCKKGDVVERKSKKNRIFYGCSNYPECDFVTWDKPIGRDCPK
CQHYLAESKKGRATQVVCSNCDYKEEVQK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
ttggcagataatcttgtcattgttgaatcgcctgcaaaagcgaaaacaatagaaaaatat
ttaggcaaaaaatacaaagtgatcgcatcaatgggtcatgtgagagatttaccacgtagt
caaatgggcgtggacgttgaacatgactatgaacctaaatatattactatccgaggtaag
gggccagttgttaaagatttgaagagacatgcgaaaaaagcgaaaaaagtttttctcgca
agtgaccccgatcgtgaaggtgaagcaattgcatggcacttggcaaacattttagaacta
gaagatagtaaagaaaatcgtgtggtttttaacgagattacgaaagacgctgtaaaagaa
agttttaaacatccacgcggtattgaaatggatttagtcgatgcgcaacaagctcgacgc
gtattagaccgtttagtgggttataatatttcacccgtattatggaaaaaagtaaaaaaa
ggtttatcagccggacgtgtacaatctgtagcattacgtcttgtgattgaccgtgaaaat
gaaattcgtaactttaaacctgaagagtattggtcgattgaaggcgaatttcgatatgga
aaatcaaagtttaatgccaagtttcttcattataaggataaaccgttcaagttagcgacg
aaagatgatgtgacagtcattacgaaagcattagacggtaatcagttcacagtatctaac
gtgacaaaaaaagaaaaaacacgtaaacctgccaacccatttacgacctccactttacaa
caagaagcggctcgaaaattaaatttcaaggcgcgtaaaacgatgatggtggcacaacaa
ctttatgaaggtattgacttgaagcgtaaaggtacgattggtcttatcacatatatgaga
acggattcgacacgtatttcaaaagatgcgcaaaatgaagcgaaacaatatatcgagtca
gaatacggcagtgaatatttatctaaagtgaccaaaaagggtaaacaaggtgaccaagat
gcccatgaagcgattcgtccaacaagcacgttaagaacacctgctgagatgaaagactat
ttaacacgtgatcaatatcgtttgtacaaattgatttgggaacgctttgtggcgagtcaa
atggcacctgcaattttagatacggttgctgtcgatttaacacaaaatgatgtgaagttt
agagcaaacggtcagacgattaagtttaaaggttttatgacactgtatgttgaaacagat
gatgacaagggcaaagaaaaagaaaatcgtttgccgaagcttgaagttggtaatgaagtg
ttggcgactaaaatcgacccggcacaacactttacacaaccaccaccacgctatacagaa
gcacgtcttgttaaaacattagaagaacttaaaattggtcgtccttcaacgtatgcgcca
acaattgatacgattcagaagcgtaattacgtgaagaatgaaagtaaacgtttcgtccca
actgaattgggagagatcgtgcatgaacaagtgaaagagtacttccctgagattatcgat
gtcgacttcactgtaaacatggaaacgttactcgataaaattgcggatggcgacgtggct
tggaaaaaagtagtaggtgactttttcaatagctttaaacaagacgttgaacgcgcggaa
gaagaaatggaaaaggttgaaattaaagacgaacctgctggcgaagattgtgaagtgtgt
ggcaatccaatggtcattaaaatgggacgctatggtaagttcatggcatgttctaatttc
cctgattgccgaaacacgaaagcgattacgaagccgattggtgtgacatgtccaaaatgt
aaaaaaggcgatgtcgttgaacgtaagtctaagaaaaaccgtattttctatggttgttcg
aattatccagagtgtgattttgttacttgggacaaaccgattggccgtgattgtccgaaa
tgtcaacactacttggcagaaagtaagaaaggacgtgcgacacaagtcgtatgttcaaac
tgtgactataaagaagaagtacaaaaataa
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