Staphylococcus delphini: NCTC12225_01841
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Entry
NCTC12225_01841 CDS
T06587
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
sdp
Staphylococcus delphini
Pathway
sdp00220
Arginine biosynthesis
sdp00240
Pyrimidine metabolism
sdp00250
Alanine, aspartate and glutamate metabolism
sdp01100
Metabolic pathways
sdp01110
Biosynthesis of secondary metabolites
sdp01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sdp00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
NCTC12225_01841 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NCTC12225_01841 (carB)
00220 Arginine biosynthesis
NCTC12225_01841 (carB)
Enzymes [BR:
sdp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
NCTC12225_01841 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp
ATPgrasp_Ter
GARS_A
ATP-grasp_4
RimK
ATP-grasp_5
ATP-grasp_2
Radical_SAM
Intein_splicing
PA
Motif
Other DBs
NCBI-ProteinID:
VED63206
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All DBs
Position
1:complement(1880894..1884067)
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AA seq
1057 aa
AA seq
DB search
MPKRNDIQTILVIGSGPIIIGQAAEFDYAGTQACLALKEEGYRVILVNSNPATIMTDKEI
ADKVYIEPLTHDFIARIIRKEQPDALLPTLGGQTGLNMAIELHNSGVLEENSVTLLGTKL
SSIEQAEDRELFRSLMNDLNVPVPESDIVNTLEQAFAFKEAVGYPLIVRPAFTMGGTGGG
ICHNDEELREVVSNGLKYSPATQCLIEKSIAGFKEIEYEVMRDKNDNAIVVCNMENIDPV
GIHTGDSVVVAPSQTLSDVEYQMLRDVSLKVIRALEIEGGCNVQLALDPHSMQFYIIEVN
PRVSRSSALASKATGYPIAKLAAKIAVGLTLDEMKNPVTGTSYAAFEPSLDYIVSKIPRF
PFDKFEKGERELGTQMKATGEVMSIGRTYEESLLKAIRSLEYGVHHLGLPNGESFDLDYI
KSRIKAQDDERLFFIGEAIRRGTTLEELHEMTKIDYFFLNKFKNIIDMEHALKAHPGDID
YLRFAKRFGFSDRVIAHRFEMTEAEVYELRQQHNIRPVYKMVDTCAAEFESTTPYFYGTY
EEENESRVTEKEKIIVLGSGPIRIGQGVEFDYATVHAVWAIQNAGYEAIIINNNPETVST
DFSISDKLYFEPLTEEDVMNIINLEQPKGVVVQFGGQTAINLADKLAKYGVKILGTSLED
LNRAEDRKEFEALLNKIDVPQPKGKTATSAQEALDNARDIGYPVVVRPSYVLGGRAMEIV
YNDAELENYMNEAVKASPEHPVLVDRYLTGKEIEVDAISDGETVIIPGIMEHIERAGVHS
GDSIAVYPPQTLSQDVIDTLEAYTIKLAKGLNVIGLINIQFVLAHDGVYVLEVNPRASRT
VPFLSKITEIQMAQLAMQAIMGQKLTDLGFQPGIQPYKEGVFVKAPVFSFNKLKNVDITL
GPEMKSTGEVMGRDITLEKALYKGLTAAGMEVKDYGTALITVSDKDKEEMVKIAKRLSEV
GYKIVATAGTAATLKDHDINVETVEKIGGHDDLITKIQDGSVQLVINTMTKGKTIERDGF
QIRRASVENGVPCLTSLDTANALTNVIESMTFSMRNM
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaagaaatgatattcaaacgattttagtgattggctcaggtcctatcattatc
ggtcaagcagcagaatttgactatgcagggacacaagcatgtctcgcactcaaagaagaa
ggttaccgtgtcattttagttaactcaaaccctgcgacgattatgacggataaagaaatt
gctgacaaagtttacatcgaaccgctcactcacgattttattgcacgcattatccgtaaa
gaacaaccggatgcgctcttaccgacgctcggtggacaaacagggctcaacatggcgatt
gaactacataatagcggtgtcttagaggaaaatagcgtcacactcctcggtacgaaattg
tcatctattgaacaagcagaagaccgtgaattgttccgctcgttaatgaatgacttgaat
gtgccagtacctgaaagtgacatcgtgaatacacttgaacaagcctttgcatttaaagaa
gcagtcggttatccattaatcgtacgtccagcatttacgatggggggcacagggggcggc
atttgtcataatgatgaagagctccgtgaagtcgtttctaacgggttgaaatatagtccg
gccacgcaatgtttaattgaaaagtcgatcgcaggttttaaagaaattgaatatgaagtg
atgcgcgataaaaatgataatgcgattgtcgtatgtaacatggaaaacattgatccagtc
ggtatccatacgggggactcagtcgttgttgcaccaagccaaacattatctgacgtcgaa
tatcaaatgttgcgcgacgtgtcattaaaagtcattcgtgcgctagaaattgaaggggga
tgtaacgtccagctcgctttggatccacattcgatgcagttttacattatcgaagtgaac
ccgcgtgtgtcacgttcgtcggcactcgcttcaaaagcaacagggtatccgattgcgaaa
ctcgctgcgaaaattgcggtaggtctgacgctagatgagatgaaaaacccagttactggc
acatcttatgcggcatttgaaccaagtttagactatatcgtatcgaaaatcccacgtttc
ccatttgataagttcgaaaaaggtgaacgtgaactcggtacgcaaatgaaagcgacaggg
gaagtcatgtcgattggtcgcacgtacgaagagtctttattaaaagcgattcgttcatta
gaatacggcgtgcatcatctcggcttacctaacggcgaatcttttgacttagactacatt
aaatcacgtataaaagcgcaagacgacgaaagattgttcttcattggtgaagcgattcgt
cgtggcacaacgcttgaagaattacatgaaatgacgaagatcgattacttcttcttaaat
aaattcaaaaatattatcgatatggaacatgcattaaaggcacatccaggtgatattgat
tacttaagatttgcgaaacgtttcggcttcagcgaccgcgtcattgcgcatcgttttgaa
atgacagaagcagaagtgtatgaattacgtcaacaacacaacattcgtcctgtctataaa
atggtcgatacgtgtgcagcagaatttgaatcaacgacaccttatttctatggtacgtat
gaagaagaaaatgaatcgcgcgtcactgaaaaagagaaaattatcgtactcggttcagga
cctattcgtatcggtcaaggggtagaattcgactatgcgacagtgcatgcggtatgggcg
attcaaaatgccggttatgaagcgatcattattaacaataaccctgaaacggtatcgacg
gacttctcaatttcagacaagctctatttcgagccactgacagaagaagatgtgatgaac
atcattaatctggaacaacctaaaggcgtcgtcgtacaattcggtggccaaacagcgatc
aacttagcggacaaattagcgaaatacggtgtgaaaattttagggacatcccttgaagat
ctcaaccgtgctgaagatcgtaaagaatttgaagcgttactgaacaaaattgacgtgcct
cagccgaaagggaaaacagcgacatcggctcaagaagcactcgacaatgcacgcgatatc
ggttatcccgttgtggtccgtccatcatacgtacttggtggccgtgcgatggaaattgtg
tacaatgatgcagaacttgaaaattatatgaatgaagcagtaaaagccagtccagaacat
cctgtactcgtagaccgttacttaacaggtaaagaaattgaagtggatgccatttctgac
ggagaaacagtcattattccagggattatggaacatatcgagcgtgcgggtgttcactca
ggtgactctatcgcagtgtatcccccacaaacgttaagtcaagacgtcattgatacattg
gaagcttatactatcaaattggcgaaagggctcaacgttatcggtttaatcaatattcaa
ttcgttctcgcacatgatggggtttatgtgctagaagtgaatccacgagcgagccgtact
gtgccgttcttaagtaaaattacagaaattcaaatggcacaactcgcaatgcaagcgatt
atgggacaaaaattaacagatcttggctttcaaccaggcatccaaccgtacaaagaaggg
gtatttgttaaagcaccggtattcagctttaataaattgaaaaatgtcgacatcacactt
ggacctgaaatgaagtcaacaggagaagtgatgggtcgcgacattacgttagaaaaggcg
ctatacaaagggttaacagcagcagggatggaagtcaaagattacggtacagcattgatt
actgtcagcgataaagataaagaagaaatggttaaaattgcgaaacgtttaagtgaagtc
ggctataaaatcgtggcaacagcaggcacagccgctacgttgaaagaccacgacatcaac
gttgaaacggtagaaaaaattggaggccacgatgatttaattacaaaaattcaagacggt
tcagtccaacttgtcattaacacgatgacaaaagggaaaacgattgaacgtgacggattc
caaattcgtcgtgcatcagttgaaaatggggtcccttgtctcacttcactcgatacagcg
aacgcattaacgaatgtcattgaaagtatgacgttttcaatgagaaatatgtag
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