Staphylococcus delphini: NCTC12225_01995
Help
Entry
NCTC12225_01995 CDS
T06587
Symbol
spsC
Name
(GenBank) autolysin
KO
K13714
bifunctional autolysin [EC:
3.5.1.28
3.2.1.96
]
Organism
sdp
Staphylococcus delphini
Pathway
sdp00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
sdp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
NCTC12225_01995 (spsC)
Enzymes [BR:
sdp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
NCTC12225_01995 (spsC)
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
NCTC12225_01995 (spsC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glucosaminidase
GW
Motif
Other DBs
NCBI-ProteinID:
VED63356
LinkDB
All DBs
Position
1:2049569..2053759
Genome browser
AA seq
1396 aa
AA seq
DB search
MVKKFGYKTPTIVALTLAGTAFSGHQANAAEQVAPEKTPTNVLDDQYALKQADDAKQTPQ
GTTLAGSKEYKDPSQIDTAQVDTAAQTETPVEEGQQDAQQPATTDEATSTNHTASKSTDE
SASPATASIDEGTLNAQANSDEMASNRTQNATEDATKYPYRSSEIDTHEDATVSPDTYQA
SDTPAQQPSATNVSDSTTAQTEATQANTSTNVNNKEAVATTEDVYATQPQAAVQPEAKAT
TETAQNKTPQVDTKDTAQVDSKATATQNTTQSAATNQDNTDKVTKRALLTNETKTDATTA
KTEAPASATRQADTQAKTTTDKKATTYSAQTATDKDINANPDGPTPPRVGGKGGPPASLS
LQSTGQTAFRSAVASKPSAYQPKVKSSINDYIRKQNYKVPVYEEDYSSYFPKYGYRNGVG
KPEGIIVHDTANDRSTIDGEISYMKRNYQNAFVHGFINGQRIIETQPTDYLAWGAGAIAN
ERFIHIELVHVHSKEDFARQMNNMADYAATNLQYYGLVPDSAEYDGRGTVWTHDAVSRFL
GGTDHTDPHGYLKQHGYSYDELYDLINEKYQVKMGYASPANSSSKPSKPSTNTALKVTTD
TGLGRIKDKNSGLYVTVYDKTGKSTSATNQTLKVTKKASLNGQSFYLVTDYATGTYVGWA
KQADVEYQTSKAPSKVSKNYTIKSGAKLYQVPWGTSKQVAGTVTGAATQTFKTTLSQTVG
KATYLYGTVGKLSGWINASSVAANDQKPSTNTALKVTTDTGLGRIKDKNSGLYVTVYDKT
GKSTSATNQTLKVTKKASLNGQSFYLVTDYATGTYVGWAKQADVEYQTSKAPSKVRQNYT
IKSGAKLYQVPWGTSKQVAGTVTGAATQTFKTTLSQTVGKATYLYGTVGKLSGWINSTAL
TVQKAAASSVTKAVSQIGQLNTKNSGIKASIYDKTAKSAARWAGQTYKITKTASANNEDY
VLLQNNTGGTPLGWFYAKDVTTRSLGAETAIKGNYTVNSKTSGLYAMPWGTTKQRVDTLK
NGASRLFTASKSVKVGNDTFLFGTVNQKLGWINQKDLTAVAAKVANIKTASNSAVKGAAI
TTLKKVEDYVITNKNGYYYTKVGDSKSAGALKGFYQQLFKVEKSSLLNGITWYYGAFQNG
TKGWIKAADVRSSFIQHTAVSSTLKAALDKQMALTYPPQVQRVAGKWVNANRSETEKAMN
TAALEKDPTLMYQFLKLDQYQGLGAEELNKLLRGKGILEGQGAAFKEAAQKHNINEVYLM
SHAFLETGNGTSQLANGGHVDKNNKVVTTGKPKYYNMFGIGAIDTDALRNGFKTAERYGW
NTVSKAIIGGAKFIRDQYIGSGQNTLYRMRWNPEHPATHQYATDINWANVNAQRMKYFYD
QIGETGKYFDVDVYKK
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaaaatttggttataaaacacctacaatcgttgcacttactttggctggaact
gcattttctgggcaccaagccaatgccgctgaacaagttgcacctgaaaaaacacctacg
aatgtacttgatgatcaatacgctttaaaacaagctgatgatgcgaaacaaacgccacaa
ggcacaacacttgcaggttcaaaagaatacaaggatccttcacaaattgatacggctcaa
gtcgatacagcagcacaaactgaaacgcccgtagaagaaggacaacaagacgcacaacaa
cctgctacaactgatgaagcgacatcaacaaatcatactgcatcaaaaagtacagatgaa
agtgcatcacctgcaacagcttctatagatgaaggcacattaaacgcccaagccaattca
gatgaaatggctagtaaccgtacacaaaacgctactgaagatgcgacaaaatatccttat
cgttcaagtgaaatcgatacacatgaagacgcaactgtgtcaccagatacatatcaagca
tcggacacgcctgcgcaacaaccttcagcaacaaatgtaagcgattcaacaacagcacaa
actgaagcgacgcaagcaaatacgtcaacaaatgtaaataacaaagaggctgttgcgaca
acagaagatgtatatgctacacaacctcaagcagctgtacaacctgaagcgaaggcaacg
acggaaacagctcaaaataaaacacctcaagttgacacaaaagacacagcgcaagttgac
agtaaagcaacagcaactcaaaatacaacacagtcagcagcgacgaatcaagacaatact
gacaaagtcacaaaacgcgcattattgacaaacgaaacaaaaacggatgctacaacagcg
aaaacagaagcacctgcttcagcaacacgtcaagctgatacacaggcgaaaacgacaaca
gacaagaaggcaacaacttacagtgcacaaacagcaactgacaaagacatcaatgcgaat
ccggacggtccaacacctccacgcgttggcggtaaaggcggtccccctgcttcactttca
ctccaatcgactggtcaaaccgcattccgttcagctgtcgctagtaaaccgagtgcatat
caacctaaagtgaaatcgtctatcaatgactatattcgtaagcaaaactataaagtgccg
gtatacgaagaagattattcaagttacttccctaaatacggttatcgtaatggagtcggt
aaacctgaaggcatcatcgtgcatgatacagcaaatgaccgctctaccattgatggcgaa
atcagctacatgaaacgaaattatcagaatgcattcgtgcacggttttattaatggtcaa
cgtattattgaaacacaaccgacagattatttagcatggggtgctggtgccattgccaat
gaacgttttattcatatcgagcttgttcacgttcattcgaaagaagattttgcacgtcaa
atgaacaatatggcggattacgcagcaacaaacttacaatattatggccttgtaccggat
agtgctgaatatgatggtcgtggtacagtttggacacatgatgctgtttctagattttta
ggtggtacagaccataccgatccacatgggtatttaaaacaacatggttattcgtatgat
gagttatatgatttaatcaatgaaaaataccaagtgaaaatgggttatgcttcacctgct
aactcgtcttcaaaaccatcaaaaccatcaacgaataccgcattaaaagtaacaactgac
acaggtctcggtcgcattaaagataaaaatagtggcttatatgtaacagtatatgataaa
actggtaaaagcacttcagccacaaatcaaaccttaaaagtaacgaaaaaagcaagtcta
aatgggcaatcattctacttagtaacagactatgccacaggaacatatgtcggttgggct
aaacaagctgatgtcgaatatcaaacaagtaaagccccttctaaagtgagcaaaaattat
acgattaaatcaggcgcgaaattgtatcaagtgccttggggtacaagtaaacaagttgcc
ggtacagtgacaggtgctgcaacacaaacattcaaaacaacactatcacaaactgtaggt
aaagcaacctacttgtacggtactgttggtaaattatcgggttggattaatgcgagcagt
gttgcagcaaacgaccaaaaaccatcaacgaataccgcattaaaagtaacaactgacaca
ggtctcggtcgcattaaagataaaaatagtggcttatatgtaacagtatatgataaaact
ggtaaaagcacttcagccacaaaccaaaccttaaaagtaacgaaaaaagcaagtctaaat
gggcaatcattctacttagtaacagactatgccacaggaacatatgtcggttgggctaaa
caagctgatgtcgaatatcaaacaagtaaagccccttctaaagtgaggcaaaattatacg
attaaatcaggcgcgaaattgtatcaagtgccatggggtacaagtaaacaggttgccggt
acagtgacaggtgctgcaacacaaacattcaaaacaacactatcccaaactgtaggtaaa
gcaacctacttgtacggtacagttggtaaattatcgggttggattaattcaacagcatta
acagtacaaaaagcagcagcaagtagcgtcacaaaagcagtttctcaaatcggtcaactg
aacacgaaaaatagcggtatcaaggcttctatttatgacaaaacagcaaaaagtgcagcg
agatgggcaggtcaaacttataaaattacaaaaacagcttctgccaataacgaagactat
gtattactgcaaaacaatacaggaggcacgccactcggttggttttatgcaaaagatgtc
acaacacgtagcttaggtgcagaaacagctattaaaggtaattacacagtcaatagtaaa
acatctggcctctacgctatgccttggggtacaacgaaacaacgtgtcgatacattaaaa
aatggagcaagtcgtttatttacagcttcaaaatcagttaaagtcggtaatgatacattc
ttattcggtacagtgaatcaaaaattgggttggattaatcaaaaagacttaacagctgta
gcggcaaaagtcgcaaacattaaaaccgcatcgaacagcgctgttaaaggggccgcaatc
acaactttgaaaaaagtagaagattacgtgattacgaacaaaaacggttattattacact
aaagttggagattcgaaatcggctggtgctttaaaaggcttttatcaacaactttttaaa
gtcgaaaaatcatctttactgaatggtattacttggtactatggcgcattccaaaatggt
acgaaaggatggattaaagcagctgacgtacgctcatcattcattcaacacactgcagtc
agtagcacattgaaagcagcactcgataaacaaatggcgttgacttacccgcctcaagtt
caacgtgtagctggtaagtgggtcaatgcgaatcgttcagaaactgaaaaagcaatgaat
accgcagcacttgaaaaagatccgacactcatgtatcaatttttaaaacttgatcaatac
caaggtctcggcgcggaagaactcaataaattgttaagaggtaaaggcattttagaaggt
caaggtgccgcgtttaaagaagccgcacaaaagcataacattaatgaggtttacttaatg
tctcacgcatttttagaaacaggtaacgggacttctcaacttgcgaatggcggtcacgta
gataaaaataataaagtcgtaacaacaggtaaaccgaagtattacaacatgttcggtatc
ggggcaatcgatacagacgctttacgcaatggctttaaaactgctgaaagatatggttgg
aatacggtcagcaaagcgattatcggtggcgcgaaattcatccgtgatcaatacatcggt
tcaggacaaaacacattgtatcgtatgcgttggaatccagaacaccctgccacacatcaa
tatgcgactgatattaattgggcaaatgtgaacgcacaacgtatgaaatatttctatgat
caaatcggtgaaacaggtaaatacttcgacgtcgatgtgtataagaagtaa
DBGET
integrated database retrieval system