Staphylococcus delphini: NCTC12225_02108
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Entry
NCTC12225_02108 CDS
T06587
Symbol
rocD
Name
(GenBank) ornithine--oxo-acid transaminase
KO
K00819
ornithine--oxo-acid transaminase [EC:
2.6.1.13
]
Organism
sdp
Staphylococcus delphini
Pathway
sdp00330
Arginine and proline metabolism
sdp01100
Metabolic pathways
sdp01110
Biosynthesis of secondary metabolites
Module
sdp_M00972
Proline metabolism
Brite
KEGG Orthology (KO) [BR:
sdp00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
NCTC12225_02108 (rocD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdp01007
]
NCTC12225_02108 (rocD)
Enzymes [BR:
sdp01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.13 ornithine aminotransferase
NCTC12225_02108 (rocD)
Amino acid related enzymes [BR:
sdp01007
]
Aminotransferase (transaminase)
Class III
NCTC12225_02108 (rocD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
KYNU_C
Motif
Other DBs
NCBI-ProteinID:
VED63464
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Position
1:complement(2178441..2179640)
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AA seq
399 aa
AA seq
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MVTKSEEIIEKTNHYGAHNYLPLPIVIAEAEGVWVKDPEGNRYMDMLAAYSAVNQGHRHP
KIIQAVKEQADRVTLVSRAFHSDNLGEWYEKICKLSGKEKALPMNTGAEAVETALKAARR
WAYEVKGIKPNEAEIIAMVGNFHGRTMAPVSLSSEKEYQRGYGPLLEGFQNVEFGNIESL
KAAINENTAAVLIEPIQGEAGINIPPEGYLKAVRELCDEHNVLFIADEIQAGLGRTGKLF
ATDWDDVKPDVYILGKALGGGVLPISVVLADKEVLDVFTPGSHGSTFGGNPLACAASIAA
LDVIVDEDLPGRSLELGDYFKNALLEIDHPAIKEVRGRGLFIGVELHEDARPYCERLKDE
GLLCKETHDTVIRFAPPLIITKEELDFAIEKVKKVFAQG
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaaaatctgaagaaatcattgaaaaaacgaatcattacggggcgcataactat
ttaccgcttccaatcgtgattgccgaagctgaaggggtatgggtaaaagacccagaaggc
aatcgttatatggatatgttagcggcatattcagcagtcaaccaagggcatcgtcaccct
aaaattattcaagctgttaaagaacaagcggatcgtgtcacactcgtttctcgtgctttc
catagtgacaatttaggggaatggtatgaaaaaatctgtaaattatcagggaaagagaaa
gccttaccgatgaatacaggtgcagaagcggtagaaacagcattaaaagctgcacgtcgt
tgggcgtatgaagtgaaaggcattaaaccaaatgaagctgaaatcattgcgatggtcggt
aacttccacggtcgtacaatggcgccggtatcactttcatcagaaaaagaatatcaacgt
ggttatgggccactattagaaggtttccaaaatgttgagtttggtaacattgaaagttta
aaagcggccattaatgaaaatactgctgctgttttgattgagccgattcaaggtgaagca
gggattaacattccaccagaaggctatttaaaagcagtacgtgaactttgtgacgaacac
aacgtattatttattgcagacgaaattcaagctggtttagggcgtacaggtaaactcttt
gcgacagattgggatgatgtaaaaccagacgtttacattttaggaaaagcactcgggggc
ggtgtattaccaatttcagttgtacttgcagataaagaagtactggatgtcttcacacca
ggttcacatggttcgactttcgggggtaatccactcgcatgtgccgcttcaattgctgca
cttgatgtcattgttgatgaagacttaccaggtcgctcacttgaactcggtgactatttc
aaaaatgcattacttgaaattgatcacccggcgattaaagaagtacgtggtcgcggtctc
tttatcggtgtggaattgcatgaagatgcacgtccttattgcgaacgtcttaaagatgaa
gggcttttatgtaaagaaacacacgatacagtcattcgatttgcacccccattaatcatc
acaaaagaagagttagattttgcgattgaaaaagtgaaaaaggtgttcgcacaggggtaa
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