Staphylococcus delphini: NCTC12225_02540
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Entry
NCTC12225_02540 CDS
T06587
Symbol
dnaX_2
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sdp
Staphylococcus delphini
Pathway
sdp03030
DNA replication
sdp03430
Mismatch repair
sdp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC12225_02540 (dnaX_2)
03430 Mismatch repair
NCTC12225_02540 (dnaX_2)
03440 Homologous recombination
NCTC12225_02540 (dnaX_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdp03032
]
NCTC12225_02540 (dnaX_2)
03400 DNA repair and recombination proteins [BR:
sdp03400
]
NCTC12225_02540 (dnaX_2)
Enzymes [BR:
sdp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC12225_02540 (dnaX_2)
DNA replication proteins [BR:
sdp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC12225_02540 (dnaX_2)
DNA repair and recombination proteins [BR:
sdp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC12225_02540 (dnaX_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
DnaX_C
DNA_pol3_gamma3
AAA_5
AAA_30
ResIII
TIP49
AAA_22
AAA_14
AAA_19
Mg_chelatase
AAA_16
AAA_18
AAA_assoc_2
nSTAND3
PIF1
RCF1-5-like_lid
RNA_helicase
AAA_2
DUF815
TsaE
AAA_28
Motif
Other DBs
NCBI-ProteinID:
VED63869
LinkDB
All DBs
Position
1:complement(2612621..2614324)
Genome browser
AA seq
567 aa
AA seq
DB search
MDYQALYRMFRPQSFEDVVGQEHVTKTLKNAIAKGKQSHAYIFSGPRGTGKTSIAKIFAK
AINCEVRDDGEPCNECASCKGITQGYNSDVIEIDAASNNGVDEIRNIRDKVKYAPSESKY
KVYIIDEVHMLTTGAFNALLKTLEEPPAHAIFILATTEPHKIPPTIISRAQRFDFKAINA
NRIVDRLSYVAHQQQIEFDEAALTFIAKVSEGGMRDALSIMDQAIAFGDERLTLKDALDV
TGSLDESDLNVLFQDIVQGHVHEAFERYHQFVSEGKEVNRLINDMIYFVRDTIMAKTTQL
ETEYDALMPFNLEALYKMIDVINDTLVSIRFSVNQNVHLEVLLVKLSEMVKEVGRTGEVV
VNHAPTEQHDAMIRRMEALESELQTLKSQGFSTATAPPKPQAPTKRRGSGSTYSVEQIAK
VLDKANKEDIALIKERWADVIQYAKDRNQKSLVSLLQNSEPVAASEDKVLIKFDEEIHCE
ILKKDEEKKQSIENVVKDMINKSVEVVGVPADKWMQVRSDYISNRKRENTQNNASEAEKP
AEQQNDVVQTAKDLFGEEMVHLMDEET
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
ttggattaccaagcattatatcgtatgtttcgtcctcaaagctttgaagatgttgtaggg
caggaacatgtgaccaaaacacttaaaaatgctattgctaaaggtaaacagtcgcatgct
tatatttttagtgggccacgtggtactgggaaaacgagtatcgctaaaatatttgccaaa
gcgattaactgtgaagtacgtgatgacggcgaaccgtgtaatgaatgtgcaagttgtaaa
ggcatcacacaaggatacaattctgatgtgattgaaattgacgcagcaagtaacaatggt
gtcgacgaaattcgtaatattcgtgataaggtgaaatatgccccgagtgaatcgaaatat
aaagtgtacattattgacgaggtacacatgttgacgacaggggcgttcaatgcgttgttg
aaaacgttagaagagccgcctgcacacgccatttttattcttgcgacgactgaaccacat
aaaataccgccgacgattatttcacgtgcacaacgctttgacttcaaggcgattaatgcc
aaccgtattgtggaccgtttgagctatgtggcacaccaacaacaaattgagtttgatgag
gctgctttgacgtttatcgctaaagtgtctgaaggtgggatgcgtgatgcgctcagtatt
atggaccaagcgattgcatttggtgacgaacgtttgacattaaaggatgctttagatgta
acggggagtttagacgaatctgacctcaacgtccttttccaagacattgttcaaggtcat
gtccatgaagcctttgagcgctatcatcaattcgtgagtgaaggtaaagaagtgaatcgt
ctcattaatgacatgatttattttgtaagagatacgattatggcaaaaacgacgcaatta
gaaacagaatacgatgcgcttatgccatttaatttagaagccttatacaaaatgatagat
gtcattaacgacacactcgtatccattcgatttagtgtgaatcaaaacgtccatctagaa
gtcttgctcgtgaagttatctgaaatggtgaaagaagtgggccgtacaggtgaagtcgta
gtcaatcatgcgccaactgaacaacatgacgcgatgataagacgaatggaagcgttggag
tctgagttacaaacattaaaatctcaaggcttctccacagcgactgcaccacctaagcca
caagcaccaactaaacgtcgaggaagcggttcgacgtattctgttgagcaaattgcgaaa
gtattggataaagcgaataaagaagacattgcactgattaaagaacgctgggcagatgtc
attcaatatgcgaaagatcgtaatcaaaaatcgctcgtcagcctgcttcaaaattcagaa
cctgtcgcggcaagtgaagataaagtgttaatcaaatttgacgaagaaattcattgcgaa
atcttgaaaaaagacgaagagaaaaagcaaagtattgaaaatgtcgtgaaagatatgatt
aacaaatctgtagaagtcgtcggtgtcccagctgataaatggatgcaagtgcgcagtgat
tacatttcaaatcgtaaacgtgagaatactcagaacaacgcatcagaagcagaaaaacca
gctgaacaacaaaatgacgtcgtacaaactgcgaaagatttgttcggtgaagagatggtg
catctgatggatgaagaaacatga
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