Staphylococcus delphini: NCTC12225_02708
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Entry
NCTC12225_02708 CDS
T06587
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
sdp
Staphylococcus delphini
Brite
KEGG Orthology (KO) [BR:
sdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdp03016
]
NCTC12225_02708 (trmE)
Transfer RNA biogenesis [BR:
sdp03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
NCTC12225_02708 (trmE)
Prokaryotic type
Methyltransferases
NCTC12225_02708 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
RsgA_GTPase
Ras
GTP_EFTU
Roc
cobW
Motif
Other DBs
NCBI-ProteinID:
VED64030
LinkDB
All DBs
Position
1:complement(2795401..2796783)
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AA seq
460 aa
AA seq
DB search
MEQLDTITSISTPMGEGAIGIVRLSGYDAVEIADKLYKGKHLLKDVPTHTINYGHIIDPE
TEEVVEEVMVSVLRAPRTFTREDIVEINCHGGILTINRVLELTMTYGARMAEPGEYTKRA
FLNGRIDLSQAEAVMDFIRSKTDRASKVAMNQIEGRLSDLIKRQRQSILEILAQVEVNID
YPEYDDVEDATTEFLLERSQEIKQEIQKLLDTGVQGKIMREGLSTVIVGKPNVGKSSMLN
NLIQDNKAIVTEVAGTTRDVLEEYVNVRGVPLRLVDTAGIRETEDIVERIGVERSRKALS
EADLILFVLNYNEPLTEDDRKLYEVIKNEDAIVIINKTDLEQRLDLAEVETMVGDMPIIQ
TSMLQQQGIDELEIQIRDLFFGGEVQSQDMTYVSNSRHISLLKQAKNAIQDAIDAAEMGV
PMDMVQIDLTRTWEILGQIIGESASEELIDQLFSQFCLGK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtggaacaactggatacgataacgagtatatcaacaccaatgggggaaggggcaatcggt
attgtccgtttatcaggttatgatgcggtcgagattgcagataagctatataaaggaaag
catctgttaaaggatgtcccgacgcatacgattaattatggtcatattattgatccggaa
actgaagaagtcgttgaagaggtgatggtgtcagtattacgcgcaccacgtacgtttaca
cgagaagatatcgtggagattaactgtcatggtggtattctgacaatcaaccgtgtactt
gaattaacgatgacatacggcgcaagaatggctgaacccggtgaatatacgaagcgtgct
ttcttaaatggtcgtatcgatttatcacaggctgaagcggtcatggactttatccgttct
aagactgaccgggcgtctaaagtagcgatgaatcaaattgaagggcgtttgagtgactta
attaagcgtcaacgtcaatcgattttggagattttggcacaagtcgaagtgaatatcgat
tatcctgaatatgatgatgtagaagacgcgacaaccgagtttttattagagcgttcacaa
gagattaaacaagaaattcaaaagttactcgatacgggtgtacaaggtaaaattatgcgt
gaaggtttatcaacagtcatcgttggtaagccaaacgttgggaagtcttcgatgttgaac
aatctcattcaagataacaaagcgattgtgacggaagttgctgggacaacgcgtgacgtg
ctcgaggaatatgtcaatgtccgcggtgtaccgttaagattggttgatacagccgggatt
cgtgagacagaagatattgtcgaacgtatcggtgtggaacgttcgcgtaaagctttaagt
gaagcggatttaattctattcgttttaaactataacgaaccattaacggaagatgatcgt
aaattatatgaagtgattaaaaacgaagatgcgattgtcattattaataaaactgattta
gaacaacgcttagaccttgcagaagtggaaacaatggtaggagacatgccaatcattcaa
acttcgatgctccaacaacaagggatagacgagttagaaatacaaatacgtgatttattc
tttggtggagaggtacaaagccaagatatgacgtacgtgtctaattctcgccacatttca
ttattaaagcaagctaaaaatgcaatacaggatgcgattgatgctgcagaaatgggtgtc
ccaatggatatggtacaaatcgacttaacgcgcacatgggaaattttaggtcaaattata
ggtgaatccgcaagtgaagaattgatcgatcaactgtttagtcaattctgtctcggaaaa
taa
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