Streptococcus dysgalactiae subsp. equisimilis 167: SDSE167_1782
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Entry
SDSE167_1782 CDS
T02870
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sdq
Streptococcus dysgalactiae subsp. equisimilis 167
Brite
KEGG Orthology (KO) [BR:
sdq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdq03019
]
SDSE167_1782
03009 Ribosome biogenesis [BR:
sdq03009
]
SDSE167_1782
Enzymes [BR:
sdq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SDSE167_1782
Messenger RNA biogenesis [BR:
sdq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SDSE167_1782
Ribosome biogenesis [BR:
sdq03009
]
Prokaryotic type
rRNA helicases
SDSE167_1782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
TerL_ATPase
SWI2_SNF2
NAT10_TcmA_helicase
Flavoprotein
Motif
Other DBs
NCBI-ProteinID:
BAN94158
LinkDB
All DBs
Position
complement(1599466..1600809)
Genome browser
AA seq
447 aa
AA seq
DB search
MSFKDYHFKQYIQQALEEIGFVNPTEVQQRLIPIVNSGRDLVGESKTGSGKTHTFLLPIF
EKLDEAKAEVQVVVTAPSRELATQIFDACKQIAKHSPKDIRLANYVGGTDKLRQIEKLKS
GQPHIVIGTPGRIYDLVKSGDLAIHKATTFVVDEADMTMDMGFLDTVDKIAASLPKSVQI
LVFSATIPQKLQPFLKKYLTNPVIEQIKTETVIADTIDNWLVSTKGRDKNGQILEILKTM
QPYMAMLFVNTKERADDLHAFLVANGLKVAKIHGGIPPRERKRIMNQVKKLDFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGMAGTAITLYQPSDDSDIKELEKM
GIVFTPKMLKNGEFQDTYDRDRRQNREKSYQKLDTEMIGLVKKKKKKVKPGYKKKIQWAV
DEKRRKERRAENRAKGRAERKAKKQSF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaaagattatcattttaagcaatacatccagcaagcactggaggaaattggc
tttgtcaatccaacagaggtccagcaacgcttgattcctattgtcaactccggccgtgac
ttagttggggaatcaaaaacaggttcagggaaaacccacacctttttattgcccattttt
gaaaaacttgatgaagctaaagcagaagtgcaagttgttgttacagctcctagccgtgaa
ttagctactcaaatttttgatgcctgtaaacaaattgctaagcattctcccaaagatatc
cgtttggctaactatgtgggaggtacggataaattacgccaaattgaaaagttaaaaagc
ggccagccacacattgtcattggaactccgggtcgtatttatgatttggttaaatctggt
gacttagcgattcataaggccacgactttcgttgtggatgaggctgacatgaccatggac
atgggctttttggatacggttgataagattgcagcttctcttccaaagtctgttcagatt
ttggtgttctcagcaaccattccacagaaattacagccctttttgaaaaaatacttgacc
aatcctgttattgaacaaatcaaaacagagacagttattgctgatacgattgataactgg
cttgtgtcgacaaaaggcagggataaaaatgggcaaattttagagattcttaaaacgatg
cagccctatatggcaatgctttttgtcaatactaaagagcgcgcagatgacttgcatgcc
tttttagtggccaatggtttgaaggtagccaagattcatggtggcattcctccaagagaa
cgtaagcgtatcatgaaccaagttaaaaagttggactttgaatacattgttgctactgac
ttggcagcgcgcggaattgacattgaaggggtcagccatgtcatcaatgatgctattcca
caagatttatctttctttgtccatcgtgtaggccggacaggtcgaaatggtatggcagga
actgctattaccctttatcaaccaagtgatgactccgatatcaaagagttggaaaaaatg
ggaattgtctttacaccgaagatgctcaaaaatggagaatttcaagatacctatgaccga
gatcgtcgtcaaaaccgtgagaaatcttatcaaaaattagacacggaaatgattggtttg
gtgaagaagaaaaagaaaaaagtcaaaccaggttataagaaaaaaattcagtgggcggtt
gatgaaaaacgtcgcaaagaacgtcgcgctgaaaaccgtgccaaaggccgtgccgagcgt
aaggctaaaaaacaaagtttttaa
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