Sulfuricella denitrificans: SCD_n00044
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Entry
SCD_n00044 CDS
T02857
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sdr
Sulfuricella denitrificans
Pathway
sdr03030
DNA replication
sdr03410
Base excision repair
sdr03420
Nucleotide excision repair
sdr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCD_n00044
03410 Base excision repair
SCD_n00044
03420 Nucleotide excision repair
SCD_n00044
03440 Homologous recombination
SCD_n00044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdr03032
]
SCD_n00044
03400 DNA repair and recombination proteins [BR:
sdr03400
]
SCD_n00044
Enzymes [BR:
sdr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SCD_n00044
DNA replication proteins [BR:
sdr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SCD_n00044
DNA repair and recombination proteins [BR:
sdr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SCD_n00044
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCD_n00044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
BAN33893
UniProt:
S6AAN0
LinkDB
All DBs
Position
complement(52867..55587)
Genome browser
AA seq
906 aa
AA seq
DB search
METKTLLLVDGSSYLYRAFHALPDLRNRHNEPTGAIYGVLNMLRRLHKDYNADYSACVFD
AKGKTFRDDLYPEYKAHRPPMPDDLARQIEPLHEAIRAMGWPLLMVDGVEADDVIGTLSE
LAWRQGIRTVISTGDKDMAQLVNPHVTLVNTMSNEKLDEAGVETKFGVPATRIVDYLSLV
GDAVDGVPGVDKVGPKTAVKWLAQYGSLDNLIAHANEIGGVVGENLRNTLDWLPKGRELV
TIKCDVALPVELTELGPQPPDTPKLIELFERCEFKTWLRELSSEVSTQPAVGSGQPSAGE
LNFQPPASYETVLTQEALDRWLEKIADAELISVDTETTSLDPLAAQIVGISLATEAHLAA
YIPLAHHYAGVSQQLDRETVLNQLKPLLESKSRPKLGQNLKYDKHVFANHGILLDGIIHD
TLLQSYVLESHKPHDMDSMALRHLGTKTITYAEVAGKGAKQIGFDQVDLETATRYAAEDA
DITLQLHQNLYPQISPNARLDFVYRHIEMPLLDVLFTVERNGVLLDTQLLAQQSHELGTS
MLRLEKEAHLLAGQPFNLNSPKQIQEILFDQLKLPVKKKTPSGAPSTDEDVLQELALDYP
LPKVLLEYRGVAKLKSTYTDKLPRMVDPQTGRVHTRYNQAVAVTGRLASSDPNLQNIPVR
SQEGRRIREAFIATPGSHIIAADYSQIELRIMAHLSGDESLLKAFAAGEDIHRATAAEVF
GTTPAEVSSEQRRYAKVINFGLIYGMSAFGLASQLGIERSAAQSYMERYFARYPGVARYM
ERTREAAKAQGYVETVFGRRLWLPEISGANGMRRQAAERAAINAPMQGTAADLIKLAMIA
VQGWLEKNRMQSLIIMQVHDELVLEVPDAELETVRRELPGLMCGVAQLAVPLVVDVGEGP
NWEQAH
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggaaactaaaacgttgctgctggtggatggatcatcttacctgtaccgcgcatttcac
gcgctgccggatctgcgcaaccgccacaacgagccgactggcgcgatctacggcgtactc
aacatgctgcgccgcctgcacaaggattataacgccgattatagcgcctgtgtgttcgac
gccaaggggaaaaccttccgcgacgacctctacccggaatacaaagcccaccgcccgccg
atgccggatgatctggcgcgccagatcgagccgctgcacgaggcgatccgcgccatgggg
tggccgctgctgatggtggacggagtagaggccgacgacgtcatcggcactctgtccgaa
ctggcttggcgccagggcatccgcaccgtgatctcgaccggcgacaaggacatggcacag
ctggtcaatccgcacgtgacgctggtcaacaccatgagtaacgaaaagcttgacgaggcc
ggggtcgagaccaagttcggcgtgcccgccacgcgcatcgtcgattacctctccctggtc
ggcgacgcggtggacggcgtgccgggagtggacaaggtcggcccgaagacagccgtcaaa
tggctggcccagtatggctcgctcgataacctgatcgcccatgccaacgaaattggcggc
gtggtcggcgaaaacctgcgcaacaccctggactggctgcccaagggcagggaactggtc
accatcaagtgcgacgtggcgctgccggtggaactgaccgaactcggcccgcaaccgccg
gacacgcccaagctgatcgaactgttcgagcgttgcgagttcaagacctggctgagggag
ttgtcatcagaggtcagcacgcagcctgcggtcggcagcgggcagccatcggcgggcgag
ctgaattttcagccgccagccagctacgaaaccgtgcttacgcaagaggcgctcgaccgc
tggctggagaaaatcgccgatgccgagctgatttccgtggataccgaaaccaccagcctc
gatccgctggcagcgcagattgtcggcatttcgctggccaccgaggcccatcttgccgcc
tacatcccgcttgcccaccactacgccggcgtgtcgcagcagcttgatcgggaaacggtg
ctgaaccagctaaaaccgctgctggagagcaagtcccggcccaagctcgggcagaatctc
aagtacgataagcacgtgttcgccaaccacggcatccttctcgacggcatcattcacgac
accctgctgcaatcctacgtactcgaaagccacaagccccacgacatggactccatggca
ctgcgccacctcggcaccaagaccatcacctacgccgaggtcgcaggcaagggcgccaag
cagattggattcgaccaggtcgacctcgaaaccgccacccgctatgccgccgaggacgcc
gacatcactctgcaactgcaccagaacctgtacccgcagatctctcccaacgccaggctg
gacttcgtttatcgccacatcgaaatgcccctgctcgatgtgctgtttaccgtggagcgc
aacggggtgctgctggatacccaactgctcgcccagcaaagccacgagctcggcaccagc
atgttgcggctggagaaggaagcgcacctgctggcgggccagccgttcaacctcaattcc
cccaagcagatccaggaaatcctgttcgatcagctcaagctgccggtgaaaaagaaaacc
ccgagcggcgccccttccaccgacgaggacgtactgcaggagctggcgctggactacccc
ttgcccaaggtgctgctggaataccgcggcgtcgccaagctcaaatctacctacaccgac
aagctgccgcgcatggtcgacccgcaaaccggccgcgtccacacccgctacaatcaggcc
gtggcggtcactggccggctggccagttccgaccccaacctgcagaacattccggtgcgc
tcacaggaaggacggcgcattcgtgaagccttcatcgccacgccgggcagccacatcatc
gccgccgactactcgcagatcgaactccggatcatggcccacctgtcgggtgacgaaagt
ctgctcaaggcctttgccgccggcgaggacatccaccgcgccaccgcagcggaagtcttc
ggtaccacgccggccgaagtcagcagcgaacaacgccgctacgccaaggtgatcaacttc
gggctgatctacgggatgtccgcattcggactggcctcgcaattaggcatcgagcgctcc
gccgcccagtcctacatggaacgctacttcgcccgctatcccggcgtggcccggtacatg
gagcgcacccgagaagccgccaaggcgcagggttatgtcgaaaccgtgttcgggcgcagg
ctatggctgccggaaatcagcggcgccaacggcatgcgccgccaagccgccgaacgcgcc
gcaatcaacgcgccgatgcagggcaccgccgccgatctgatcaagctcgccatgatcgca
gtgcagggttggctggagaaaaatcgcatgcagagcctgatcatcatgcaggtgcatgac
gaactggtgctggaagtgccggacgccgaactggaaaccgtccggcgcgagctgcctggc
ctgatgtgcggcgtggcgcagctcgccgtgccgctggtagtagatgtgggggaggggccg
aactgggagcaggcgcactga
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