Sulfuricella denitrificans: SCD_n00075
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Entry
SCD_n00075 CDS
T02857
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sdr
Sulfuricella denitrificans
Pathway
sdr00061
Fatty acid biosynthesis
sdr00071
Fatty acid degradation
sdr01100
Metabolic pathways
sdr01212
Fatty acid metabolism
sdr02024
Quorum sensing
sdr04146
Peroxisome
Module
sdr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SCD_n00075
00071 Fatty acid degradation
SCD_n00075
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SCD_n00075
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCD_n00075
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sdr01004
]
SCD_n00075
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdr04147
]
SCD_n00075
Enzymes [BR:
sdr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SCD_n00075
Lipid biosynthesis proteins [BR:
sdr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SCD_n00075
Exosome [BR:
sdr04147
]
Exosomal proteins
Exosomal proteins of breast milk
SCD_n00075
Exosomal proteins of breast cancer cells
SCD_n00075
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF2399
Motif
Other DBs
NCBI-ProteinID:
BAN33924
UniProt:
S6AHF5
LinkDB
All DBs
Position
84474..86138
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AA seq
554 aa
AA seq
DB search
MVNLAGLLEQHCANPQVILYRQYADNTWRDFSAHEVMALAARWQQSFRAADYEPGDRIAL
CLKNSVNWVAIDQAALGLGLVVVPLYADDNPENLAWCLADSGARLLVLENTRLLDALIRA
MPTLPTIICLHGDVPAPAIPACRWLPENGSAFKVQDLDENLLATLVYTSGTTGRPKGVML
SHRNILSNVAAALEVVSLHPGDLLISVLPLSHMFERTCGYYVPLKAGVPVAYARSINQLA
EDLAFLKPTVMVAVPRVFQRFLARIEQALTASPLKRALFSLTVALGWRKFERRSGKVEQA
LFQLLQPLVAGPVLNRLGGRMRLAVVGGAPLELRVAQSFIGLGLNMLQGYGLTEASPIVA
GNREYDNDPITVGAPLPGVEVRVNDVGELLVRGPSVMLGYWHNPEASAEVLDADGWLNTG
DLVEIPADKIIIKGRTKDILVLSNGEKVSPQDAEMAILDDPLFEQVMLVGEGRAYLVLLA
VTQESDERTLIKHANARLKSFSRWVRVRRVIALPEPWTLAEGLLTPTLKVKRNAVHEKYR
ERIESVYRKGIKTV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggttaacctcgccggcttgcttgaacagcactgcgctaacccgcaagtcatcctttac
cgccagtatgcagacaacacctggcgcgacttttctgctcatgaggtgatggccctggcg
gctcgctggcaacagtccttccgtgccgcagattatgaaccgggcgaccgtattgcgctg
tgcctgaagaatagtgtcaactgggtggcaatcgatcaggctgcgctgggtctgggcttg
gtggtggtgccgctgtatgcggacgataatccggaaaacctggcctggtgcctggcagac
tccggcgcgcgtttgctggtgctggaaaatacccgtctgctcgatgccctgattcgggcg
atgcccacccttcccaccatcatctgtttgcacggagacgtgcccgcccccgccatcccg
gcctgccgctggttgcctgaaaatgggagcgcgtttaaggtgcaggacctggacgaaaac
ttgcttgccactctcgtttacacttccggcaccaccgggcggcccaagggcgtgatgctg
tcccatcgcaacatacttagcaacgtggcggcggcgctggaagtggtcagcctgcatcct
ggcgatctgttgatttcggtgttgccgctttcccatatgttcgagcgcacctgtggctat
tatgtgccgctcaaggccggggtgccggtggcctatgcccgttccatcaaccaactggcg
gaggacctggctttcctcaaaccgacggtgatggttgccgtgccacgggtatttcagcgc
tttctcgctcggatcgagcaggcattaaccgcttctccactcaaacgcgcgctgttttct
ctcacggtagcgctgggctggcgtaaattcgagcgccgctccggcaaagtggagcaggcg
ttgttccagctgttgcaacccctggttgccggcccggtactgaaccggctcggcgggcgc
atgcgcctggcggtggtaggcggcgcgccgctggagttacgcgtggcgcaatcattcatt
ggcctggggctaaacatgctccagggttacggcctgaccgaagcatcgcccatagtggct
ggcaaccgcgagtatgacaatgacccgattacggtaggcgcacccttgccgggcgtggag
gtcagagtcaatgacgtgggtgaactgctggtgcgcgggccctcagtgatgctgggctac
tggcataatccggaagcctctgcggaagtgctggatgcggatggctggctgaataccggt
gatctggtggaaatcccggccgacaaaatcattatcaagggccgcaccaaggatattctg
gtgctgtccaatggcgagaaagtgtcgccccaggatgcggaaatggcgattctcgacgac
cctttgttcgagcaggtgatgctggttggtgaagggcgcgcctatctggtgctgctggcc
gtgacccaggaaagcgatgaaagaactttgatcaaacacgccaatgcccggctcaaatca
ttttcacgctgggtgcgggtgcgtcgggtaattgccttgccggagccgtggacgctggcg
gaaggcctgttgacacccaccctcaaggtcaagcgcaatgcggtgcacgaaaagtatcgc
gagcggatcgagagtgtttaccgcaagggaatcaaaacggtttga
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