Sulfuricella denitrificans: SCD_n00100
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Entry
SCD_n00100 CDS
T02857
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sdr
Sulfuricella denitrificans
Pathway
sdr00550
Peptidoglycan biosynthesis
sdr01100
Metabolic pathways
sdr01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SCD_n00100
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SCD_n00100
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdr01011
]
SCD_n00100
Enzymes [BR:
sdr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SCD_n00100
Peptidoglycan biosynthesis and degradation proteins [BR:
sdr01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SCD_n00100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
BAN33949
UniProt:
S6AHH2
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All DBs
Position
108337..110241
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AA seq
634 aa
AA seq
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MNRPTELRDHQRELYYFRWRLGIAAAGAVLLFTLLVGRFFFLQVVEHDHFHTLAENNRIS
IVPVVPNRGLILDRNGIVLAHNYSAYTLEITPSKIQDLEATINGLAALVDIQPRDRKRFK
KLLVESRNFESLPIRARLNDVEVARFTANRFRFPGVDIKARLFRHYPKGELASHAIGHIG
RINEADLDRLEASEDMANYRGSDHIGKLGIEQSYEKQLHGVTGFDHVETDAGGRAIRTLS
RRDPISGSDLTLTLDSRLQEVAEKAFGEYRGALVAIDPKSGEVLAFVSKPGFDPNLFIDG
IDPVNWDALNNSLDKPLNNRALRGQYPPGSTFKPFMAMAGLELGKRTPSYTISDPGFFTL
PGNAHHYRDWKKGGHGSVDLYKSIVISCDTYYYGLGVDLGIDNITNFIGQFGFGRKTGID
IEGETSGVLPSREWKMKRYKQKWYTGDTVSASIGQGYNLATPLQLAFATAVLANNGTVIR
PHLVRSILDVATNQLRMTPAAKPVATLPFKPENLELVKKAMIAVTQPGGTAAKVGVGAPY
LTAGKTGTAQVIAIKQTEKYVESKVSERNRDHALFIAYAPADDPKIAMAILVENGGHGGS
TAGPIARLVLDYFLLGKLPPPPVPLTEAPEEEHD
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcgtccgaccgaactcagagaccatcagagggagttgtattatttcaggtggcgg
cttggcatcgctgcggcaggcgccgtactgttgttcacgctgttggtgggacgcttcttt
tttctgcaggtggtggagcacgatcattttcacaccctggcagaaaataaccgaatttcg
attgtccccgtcgttcccaatcgcggcttgatacttgaccgcaatggcattgttctggcg
cacaattactctgcctataccttggaaattacgccgagcaagatccaggatctggaggca
acgatcaatggactggcggcgctggtagacatccagccgcgcgatcgcaagcgcttcaag
aaattgcttgtggaaagccgcaatttcgagagtctgccgattcgcgcccgcttgaacgat
gtcgaggttgcccgctttaccgccaaccgcttccgttttcccggcgtagacatcaaggca
cggttgttccgccattatcccaagggggagctggcttcccacgccattggacatatcggg
cgcatcaacgaagccgacctggatcgactggaagcctcggaagatatggctaattaccgc
ggtagcgaccatattggcaagcttggcatcgaacagagttacgaaaaacagttacatggt
gtcactggcttcgaccatgtggaaaccgatgctggcggccgcgcgattcgcactctgagc
cggcgcgatccgatttcagggagcgacttgacgcttacgctcgacagtcgcttgcaggaa
gtggccgagaaggcgttcggggaatatcgtggagcactagtggccatcgatccgaagagc
ggcgaggtgctggcctttgtcagcaagcccgggttcgaccctaatctgtttattgatggc
atcgatccggttaactgggatgccctcaacaactctctcgacaagccgctcaataaccga
gctctgcgcgggcagtacccgccgggttcaaccttcaagccgttcatggcgatggccggg
ctggaactgggcaagcgcaccccttcctacactatttccgacccgggcttctttaccctg
cccggcaacgcccatcactaccgcgattggaagaagggagggcacggctcggtggatttg
tacaaatccatcgtgatttcctgtgatacttactactatggcttgggtgtcgatctgggc
atcgacaacatcaccaacttcatcggccagttcggtttcggcaggaaaaccggcatcgac
atcgagggggaaacctccggtgtgctaccctcgcgtgagtggaagatgaagcgctacaag
caaaagtggtacaccggcgacaccgtgagcgccagcatcggtcagggctataacctggct
acacctctgcaactagctttcgccacggcggtgctggccaataacggtacggttattcgc
ccgcacctggtgcgctcgattctcgatgtcgccaccaatcagttgcggatgacgccggct
gccaagcccgtcgccactctgcctttcaagccggagaatctggagttggtgaagaaggcg
atgatagctgtcacccaaccgggtggtacggcggcgaaggtcggcgtgggtgccccttac
cttaccgccggcaagaccggcacagcccaggtgatcgccatcaagcagaccgaaaaatac
gtggaaagcaaggtgtcggagcgcaatcgagaccacgccttattcatcgcttatgctcca
gccgacgatcccaagattgccatggccatcctggtggaaaacggcggccacggcggctcg
acggcggggccgatcgcccgcttggtgctggattatttcctgcttggcaagctgccgccg
ccgccagtgccgctgaccgaggcgccggaggaggagcatgattaa
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