Sulfuricella denitrificans: SCD_n00241
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Entry
SCD_n00241 CDS
T02857
Name
(GenBank) hypothetical protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
sdr
Sulfuricella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdr03016
]
SCD_n00241
Enzymes [BR:
sdr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
SCD_n00241
Transfer RNA biogenesis [BR:
sdr03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
SCD_n00241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
Motif
Other DBs
NCBI-ProteinID:
BAN34090
UniProt:
S6A9G9
LinkDB
All DBs
Position
259459..260784
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AA seq
441 aa
AA seq
DB search
MAHNACFNASYDFNLLREGLRRQGYQLVQKPEDADEVIFAGCAVRGKWVDDAIRQITSIH
DRAPKAKVTVTGCVASIDAEMVRSLTRVHNLTIGRQEDVLKRYTGLEIGTLDRDVTQDTS
IDFEGATDNGLSQLRRRLGPEKAEVVASLQQVDREHGTVLESTYRRTTRGFVFYHENEPT
EFIVVTRSCPYKCAFCAIPHGRGAYTSVPLDAVLEKARTSLARGIRRITLIGDEVGNYGA
NEKGPKFRDLMTALLDLDPGIRLSIRYLEPKPFLRNADLFRRWCGDGRIDLLYVSLQSGS
QRILDAMSRRYNIGEIANFYSTLRRTTDTVFYCNWMVGFPSETHSEYMETVSLVKDLNLQ
INTAVPFSARPNTPANDMTGQIDEQEKELRVDGLKRVIADIKVASFAGLFDVLEPARRAS
LVQKIGNAELVEHDNLMPGPA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
ttggcacacaatgcctgcttcaatgcgagctacgactttaacctgcttagagaaggccta
agacggcagggttaccaactggtccaaaagcccgaggatgctgatgaggtgatattcgca
ggttgcgccgtgcggggaaaatgggtggacgatgccatccggcaaattacttcgattcac
gaccgggctcccaaggcgaaagtgaccgtcaccggctgtgttgctagtattgacgctgaa
atggtgcgcagcctaacccgtgtgcataacctgaccatcggtcgccaagaagatgttctt
aagcgctatactggtttggaaattggcactttggatcgtgatgtcacgcaggatacctca
atcgacttcgaaggcgcgactgacaatggattgagtcaacttcggcggcgtttgggaccc
gagaaagctgaagtagttgcctcgctgcaacaggtggatagggagcatggtacggtgctg
gaatctacctaccggcgcactactaggggcttcgtcttttaccatgagaatgaacctacc
gaattcattgtggtcacccgtagctgcccttacaaatgcgcgttctgtgctatcccgcac
ggcagaggggcttacacgtcagttcctttggatgcggttcttgaaaaggcccgcacctct
ttggcccgcggaatacgacggatcactcttatcggtgacgaggtaggcaactacggcgcc
aatgagaaaggcccaaagtttcgcgacttgatgaccgcgctcctagaccttgacccgggc
attcgtctttcaattcgctacctcgagcccaaaccgtttctaagaaacgcagaccttttc
cgtcgatggtgcggggatggccgcattgatctcctttatgtgtcgctgcagagcggatct
cagcgaatcctggacgcgatgagccgccgctacaacattggcgagatcgccaacttttat
tctacgcttcgacgcacgacggacaccgtgttttattgcaactggatggtggggttcccg
agcgaaacccattcggaatatatggaaaccgttagcttggtaaaagaccttaatctccag
atcaacaccgccgttccattctcggcgcggccaaacacaccagcaaacgatatgacggga
cagatcgacgagcaggaaaaggagctgcgtgttgacgggttgaaacgggtcatcgcggac
atcaaggtggcaagttttgcaggcttgtttgatgtactcgaaccggcacgtcgagcatcg
ttagtgcagaaaatcggcaacgcggagctggtcgagcacgataacctaatgccaggccca
gcgtag
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