Sulfuricella denitrificans: SCD_n00396
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Entry
SCD_n00396 CDS
T02857
Name
(GenBank) lytic transglycosylase catalytic subunit
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
sdr
Sulfuricella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdr01011
]
SCD_n00396
Enzymes [BR:
sdr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
SCD_n00396
Peptidoglycan biosynthesis and degradation proteins [BR:
sdr01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
SCD_n00396
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Motif
Other DBs
NCBI-ProteinID:
BAN34245
UniProt:
S6A9K0
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All DBs
Position
416021..417982
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AA seq
653 aa
AA seq
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MRFILIAVVFSAGAALSAFSNVASANYEADFSAAREAFKSGNISRFDTMAARLHGHVLEP
FVAYMQLMLHLKEARPEEIKAYIQRNGDSFLADRLLAEWLRMLAKSQRWELYMSEYPALI
TRDSDLVCYALQARLALGDSTALAEAKPYWFSAEEQPSSCLPLSDALAINGLLTVEDVWA
RLRLTLEAGNVSVAKHVALYFPGQQEIPLRELDRAAENPLAFLDKLPVSLSTRAGRELTL
FALSRVARSQPQQALPYWNALQSQFGAEEQAYGWGQLALHAARKHDPAALAWFGKAVGTR
LSDLQLAWKVRAALREQNWQEVQAAIAAMSEAEQNQGSWRYWKARALKSQGKAVQGNAIL
APLSKEFNYYGQLAAGELGVVAGSPVESFKAGSDEIKAMEKLPAIQRALALYEMNLRYEA
NREWMWAVRGLDDRHLLAAAEVAQRHGWYDRAISTADRTQQLHDFSLRFPAPHRDVMQEQ
ARQVGLDEAWVYGLIRQESRFVQQARSGVGASGLMQLMPGTARWVAKRMGMKNFRQSLVN
QLDTNVMLGTYYLKYVLDKLEGQPVLATAAYNAGPSRAIRWRSEAPMEGAIYAETIPFTE
TRGYVQKVMSNAVYYGNQFGQQLQSLKQRLGTITRGSGKTDCGTDDERAPACD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgagatttatcttaattgcggttgttttttccgcgggagccgctctttccgcattcagt
aatgtggcctcggcaaactacgaggctgacttctctgcagcgcgcgaggctttcaagtct
ggcaatatttcccgtttcgataccatggccgcgcgcttgcatgggcatgtgctggagcct
ttcgtcgcttatatgcaactcatgttgcacctcaaggaagcgcgcccggaagagatcaaa
gcctacatccagcgtaacggggacagtttcctggctgaccggctgctcgctgaatggctg
cggatgctggcaaaaagccagcgctgggagctgtatatgagcgaataccctgcgctgatt
accagggactcggatctggtctgctatgccctgcaggcgcggcttgcattgggtgatagc
accgcactggcggaggccaagccctactggttcagcgcggaagagcagccgtcgagctgc
ctgcctctgtctgatgctttggcgatcaacggcctgctcaccgtggaagatgtatgggcg
cgtttgaggttgaccctggaggcgggtaacgtcagcgtggcaaagcatgttgcgctttac
ttccctggccagcaggagattcccctgcgcgaattggatcgcgcggcggaaaatccgctc
gcctttctcgataagctaccggtgagcctttcgacccgtgctggccgggagctgaccctg
ttcgccctgtcacgcgtggcccgcagccagccgcagcaggcattgccttactggaatgct
ttgcagtctcagtttggtgcggaagaacaggcttatggctggggtcagctggctttgcat
gcggcacgcaagcacgacccggctgcactagcctggtttggcaaggcggtcggaactcgc
ctttccgacttgcagctcgcttggaaggtgcgcgcggcgctgcgcgagcaaaactggcag
gaagtgcaggctgctattgctgcgatgtcggaggcggagcagaaccagggctcctggcgc
tactggaaggcgcgtgccctcaagtcgcagggcaaggcggtgcagggcaatgcaatcctg
gcaccgctatcgaaggaatttaattattatggtcaacttgcagccggggaactgggcgtg
gtggcgggttcccctgttgaaagctttaaggcgggtagtgacgagatcaaggcgatggag
aaactgcctgcaatccagcgtgcgctagcgctgtacgagatgaatctgcgctacgaggcc
aaccgtgagtggatgtgggcggtgcgcgggctcgacgaccggcacttgctggcagcggca
gaggtggcgcagcgccatggctggtatgaccgtgccatcagtacggcagataggacccag
cagctgcacgattttagcctgcgttttcctgctccgcatcgtgacgtgatgcaggagcaa
gcgcgtcaggtgggcctggacgaggcctgggtatatggcttgatccgccaggaaagccgc
tttgtccagcaggcgcgttccggcgtcggcgcgtcggggttgatgcagctgatgccgggt
acggcgcggtgggtggcgaaacgcatgggaatgaagaactttcgtcagtcgttggtcaat
cagctggataccaacgtgatgctcggcacttattatctcaagtatgtgctcgataaactc
gaaggccagccggttctggcgaccgccgcctacaacgccggccctagccgtgccattcgg
tggcgcagcgaggcgccgatggaaggcgcgatctatgctgaaactatcccgtttacggaa
acccgtggctatgtgcagaaggtcatgagcaacgccgtctactatggcaaccaattcggc
cagcagttgcagtcattgaagcagcgtctgggcacgataacgagaggcagtggaaaaaca
gactgcggcaccgatgacgagcgcgcaccggcgtgcgattaa
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