Sulfuricella denitrificans: SCD_n00480
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Entry
SCD_n00480 CDS
T02857
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sdr
Sulfuricella denitrificans
Pathway
sdr03030
DNA replication
sdr03430
Mismatch repair
sdr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCD_n00480
03430 Mismatch repair
SCD_n00480
03440 Homologous recombination
SCD_n00480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdr03032
]
SCD_n00480
03400 DNA repair and recombination proteins [BR:
sdr03400
]
SCD_n00480
Enzymes [BR:
sdr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SCD_n00480
DNA replication proteins [BR:
sdr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SCD_n00480
DNA repair and recombination proteins [BR:
sdr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SCD_n00480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
BAN34328
UniProt:
S6AB52
LinkDB
All DBs
Position
complement(506918..507622)
Genome browser
AA seq
234 aa
AA seq
DB search
MSLLKQMFGAKPQLTASQEDRLRAWRDQPEPDTRLPFDTSRLVVVDVETSGLNVRKDHLI
AIGAVTVVNGKIILADSLDIVLQQSQVSGKDNILIHGIGGEAQRQGMHPADALLAFLEFL
GKSPLIAFHVEFDQSMIGRAMKAHLGFRFEHTWADLAYVAPTLYPQLARRYRSLDQWMEL
FGIGNYARHSALADALATAELLLALRPQLEARQTMSFQGLRDLERERRLQTHPV
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctaaaacagatgttcggtgcgaagcctcagcttactgccagccaggaggat
cgcctgcgagcctggcgggaccaacccgaaccggacactcggcttcctttcgataccagt
cgactggttgtagtcgatgtcgagacgagtggcctcaacgtacgcaaggaccaccttatc
gccatcggcgctgtaacggtagtaaacggcaagatcattttggccgacagcctggatatc
gtcttgcaacaaagccaggtcagcggcaaggacaacatcctgattcacggcattggcggc
gaagcccaacgccagggcatgcatccagcagatgccctgctcgcatttctggagtttctg
ggcaagtccccgctcatcgccttccacgtcgaattcgaccagagcatgataggccgagcc
atgaaagcgcacctcggatttcgattcgaacatacatgggccgacctggcctacgttgca
ccgaccctctacccgcagctggcacgccgatatcgctcgctcgaccagtggatggaatta
ttcggcatcggcaactacgctcgtcatagcgccctggctgacgccctggccactgccgaa
ctattgcttgccctgcgacctcagctggaagcacgacagaccatgagcttccagggcctg
cgcgatcttgaacgtgaacgacggcttcaaactcacccggtctga
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