Sulfuricella denitrificans: SCD_n00561
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Entry
SCD_n00561 CDS
T02857
Name
(GenBank) 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family
KO
K03270
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:
3.1.3.45
]
Organism
sdr
Sulfuricella denitrificans
Pathway
sdr00541
Biosynthesis of various nucleotide sugars
sdr01100
Metabolic pathways
sdr01250
Biosynthesis of nucleotide sugars
Module
sdr_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SCD_n00561
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sdr01005
]
SCD_n00561
Enzymes [BR:
sdr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.45 3-deoxy-manno-octulosonate-8-phosphatase
SCD_n00561
Lipopolysaccharide biosynthesis proteins [BR:
sdr01005
]
Lipid A
SCD_n00561
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hydrolase
Hydrolase_3
HAD_2
HAD
Motif
Other DBs
NCBI-ProteinID:
BAN34408
UniProt:
S6AB78
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All DBs
Position
complement(578798..579319)
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AA seq
173 aa
AA seq
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MDAFEHAKNIKLAIFDVDGVMTDGSLYLADDGQEFKAFNSLDGHGMKMLKRSGVELAIIT
GRTSQLVTLRASNLGVTHLYQGAEDKLTAFLELLEKSGLDPAACAYMGDDVVDLPVMRRC
GLAVCVPAAPALVKQHSHYITQLPGGGGAVRELCELIMQAQGTFEMQLAPYLK
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggacgctttcgaacacgcaaaaaacatcaaactcgccatcttcgacgtggatggcgtg
atgaccgacggcagcctctacctggccgacgacggccaggaattcaaggcattcaattct
ctcgacggccacggcatgaaaatgctgaaacgctccggtgtcgaactggcgatcatcacc
ggccgaacctcgcagctggttacgctgcgcgccagcaatctgggtgtgacccatctctat
cagggtgctgaagacaaactaaccgcctttctcgaactgcttgagaaatccggcctcgac
ccggctgcatgcgcttacatgggagatgatgtggtggacttgccggtaatgcgccgctgc
ggcctggctgtttgcgttcccgccgccccggcgctggtcaaacagcactctcattacatc
acccagctgccgggcggcggcggtgccgtgcgcgaattgtgcgagctgatcatgcaggca
cagggaactttcgagatgcagttggcgccttatctgaaatga
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