Sulfuricella denitrificans: SCD_n00737
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Entry
SCD_n00737 CDS
T02857
Name
(GenBank) hypothetical protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sdr
Sulfuricella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdr03400
]
SCD_n00737
Enzymes [BR:
sdr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCD_n00737
DNA repair and recombination proteins [BR:
sdr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SCD_n00737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Cas_Cas4
Motif
Other DBs
NCBI-ProteinID:
BAN34579
UniProt:
S6AJ47
LinkDB
All DBs
Position
740602..743382
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AA seq
926 aa
AA seq
DB search
MRKFPADTVSALNLVRIAARDIVALEQEQLPRLTGLVILLPNFHAVDLMGEALCESAGAS
SLLLPRMITLTEWAEGAVLGREILPDSCRAALLYQALRERKWFADADLWHVSRELLSLFD
DMARQGTGLPASYPEFVALLEQAYRTRAGEPLQFEARLVHELWYAMNLSGDGRVDSVTAY
HLRLAGLADNASSPLYAVGLSGLTPMEQDFFRRYGERQRVHLYGCGGEDPADDLSQLVQA
ALAPMEVLNKSNAPSPAREEGANAKGACYDLRERATEFRQRCPASPLSGRLELLEAHSLE
QEAQAVDSQIREWLLAGKSAIAVIAQDRLVARRARALLERGQILVADETGWTLSTVAASA
VVMRWLDAMASRFHHLDLLDLLKSPLIFADWEGGARKHAVYGLEQLVRRHSVISGLHHYR
GLAQREGAEDVLTLLARLDQAQARFGARKRGLAAWLASLLESLEVLGLRQGLAQDLAGEQ
LLRLLERLQKELGQDQGLFTLSEWRRWLDSQLEAATFRDTGITSPVVFTHLGAARLRRFD
GVIVAGGDAAHFPGRGKESAFFNQSVRAQLGLPTFEQDLRQMEQDFTSLLADCGTLLITW
QGRKNAEPNLASPWVDRLEVFHQLAYGEDLPRRAAEILGEAADILPPLPATARPTLPPEL
VPVALSASGYNSLMACPYQFYARHALHLNELDEVQQALEKKDYGEHVHAILHHFHQHYPA
ISGCDRAEMELALRDISREEFRQALESDYLARAWALRWDMRIPAYLEWQAGREQEGWRWH
DGELWRTRELELEGGRSLTLKGRIDRVDTRTDDGEAAYAVLDYKTQSRPGLQKKLETPGE
DVQLPVYALLLEESVVEAAFVPVDDEGVKTVEQEDIYALSKATGQRLSELFNALYQGASL
PAQGSEQACAYCEMSGLCRKDYHDGQ
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaatttccggctgacactgtttctgccctgaatctggtgcgcatcgctgcacgg
gatatcgtcgcgctggaacaggagcaactgcccaggctgaccggcctggtgattttgctg
ccgaattttcatgctgtcgatttgatgggcgaggcgctgtgcgagtcggcgggagcgtct
tccctgcttctgccgcgcatgatcaccctgaccgaatgggcggagggcgcggtgctcgga
cgtgaaattctccccgacagctgccgtgctgccctgctttaccaagccctgcgcgagagg
aagtggtttgctgacgccgacttgtggcatgtcagccgggaactgctcagcctgttcgac
gatatggcccggcagggaaccggcctgccggcctcctatcccgaattcgtcgcgttgctg
gagcaggcctaccgcacccgcgccggcgaaccgctgcagttcgaggcgcgtctggtgcac
gagctgtggtatgccatgaacctcagcggcgatggccgtgtcgatagcgtcaccgcctac
catctgcgactggccggcttggctgataatgcttcctcacccttgtatgccgtcggcttg
tccggcctgactccgatggagcaggactttttccgccgttatggggaaaggcagcgggta
cacctgtacggttgcggcggagaagatccagccgatgatttgagccagttggtgcaagcc
gcccttgctcctatggaggtgctgaacaagtccaatgctccctcccccgcaagggaagag
ggggcaaacgcgaagggcgcttgttacgacttgcgcgagcgcgccaccgaattccgccag
cgttgcccggcaagcccgctgtccggtcgccttgaattgctcgaggctcatagtcttgag
caggaagcgcaggcagtggatagccagattcgtgagtggctcctggcaggcaaaagcgcc
atcgcggtgatcgcccaggaccggctggtggcacgtcgagctcgcgccctgctggagcgc
ggccagatcctggtcgcggacgaaaccggctggacgctttccaccgtggccgccagcgcc
gtggtgatgcgctggctcgacgccatggccagccgcttccaccatctcgatttgctcgac
ttgctcaaatccccgctgattttcgccgactgggagggcggggcgcgcaagcatgcggtc
tacggactggaacaactggtgcggcgccatagcgtgatttccggcttgcaccattatcgc
ggcctggctcagcgtgaaggcgcggaagacgtgctcacactgctggcccggctggaccag
gcacaggcccgtttcggcgcgcgcaagcgcgggctggcggcatggctggccagcctgctg
gaaagcctggaggtgctgggtttgcgccagggtctggcgcaggacttggcaggtgagcag
ttgctgcgcctgctcgagcgtctgcaaaaagaattgggccaggaccaggggctatttaca
ctgagcgaatggcggcgctggctcgacagccagctcgaagccgccaccttccgcgatacc
ggcatcaccagcccggtggtgttcacccaccttggcgccgcgcgcctgcgccgcttcgac
ggcgtgatcgtggccggcggcgatgccgcccattttccgggaagaggcaaggaaagtgcc
ttcttcaaccaatcggtgcgggcgcaactcgggctgccgactttcgaacaggatctgcgc
cagatggagcaggacttcacctcgctgctggcggactgcggcaccctgctcattacctgg
caggggcggaagaacgccgagcccaatctggcaagcccgtgggtagatcggctggaggtc
ttccaccaactggcctatggagaggatctgccgcgcagggcggctgagattcttggggag
gccgctgatattcttcctccgttgcccgccacggcccgcccgacattgccgcccgagctg
gttcctgttgccctctcggccagcggttacaacagcctgatggcctgcccctaccagttt
tatgcccgccacgccctgcacctgaacgaactggacgaagtgcagcaggcgctggaaaag
aaggattacggcgagcacgtccacgccatcctgcaccatttccaccagcactatcccgcc
atcagcggctgcgaccgggccgagatggaactggccctgcgtgacatcagtcgggaagaa
ttccgccaggcgctggagtcggactacctcgcccgcgcctgggcgttgcgctgggatatg
cgcattcctgcctatctcgaatggcaggcagggcgcgagcaggaaggctggcgctggcac
gacggtgagctgtggcgcacgcgagaactggaactggaaggggggcgcagcctgaccctg
aagggccggatcgaccgcgtcgatacccggactgacgatggtgaagccgcctacgccgtg
ctggattacaagactcagagccgccccggcctgcaaaagaaactggaaacgccgggtgag
gacgtgcagctcccggtgtatgcgctgctcctggaagagtcggtggtcgaagcggcattc
gtgccggtggacgatgagggtgttaaaacagtggagcaggaagatatttatgcgttgagc
aaagccaccgggcagcgcttgagcgagctgtttaatgctctgtatcaaggtgcgtcgctg
cccgcccaaggtagcgaacaggcgtgtgcttactgcgaaatgagcggcctgtgccgcaag
gattatcatgacgggcaatga
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