Sulfuricella denitrificans: SCD_n00837
Help
Entry
SCD_n00837 CDS
T02857
Symbol
glyA
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sdr
Sulfuricella denitrificans
Pathway
sdr00260
Glycine, serine and threonine metabolism
sdr00630
Glyoxylate and dicarboxylate metabolism
sdr00670
One carbon pool by folate
sdr00680
Methane metabolism
sdr01100
Metabolic pathways
sdr01110
Biosynthesis of secondary metabolites
sdr01120
Microbial metabolism in diverse environments
sdr01200
Carbon metabolism
sdr01230
Biosynthesis of amino acids
sdr01240
Biosynthesis of cofactors
sdr04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SCD_n00837 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SCD_n00837 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SCD_n00837 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SCD_n00837 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SCD_n00837 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SCD_n00837 (glyA)
Enzymes [BR:
sdr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SCD_n00837 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BAN34678
UniProt:
S6ABG1
LinkDB
All DBs
Position
836977..838227
Genome browser
AA seq
416 aa
AA seq
DB search
MFSAEQTIAKFDPELWKAMQDENRRQEDHIELIASENYTSPAVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDVAEQLAIDRVKALFGAEYANVQPHSGSQANQAVYMAVLKPGDTILGMS
LAHGGHLTHGASVNLSGKLFNAITYGLDPKTEAIDYDEVERLALEHKPKMIVAGASAYSL
IIDWKRFRKIADMVGAYLFVDMAHYAGLVAAGLYPNPVGIADFVTSTTHKTLRGPRGGII
LSSLQHEKALNSAIFPSIQGGPLMHVIAAKAVAFKEAATKEFKHYQEQVIENAIVMAKVL
QERGLRIVSGRTESHVFLVDLRAKNLTGKEAEAALGLAHITVNKNAIPNDPQKPFVTSGI
RIGTPAMTTRGFKEIEAEHLANLIADVLDAPTDEVVISRVANEAKAMCAKFPVYGK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcgcagaacagaccatcgccaagttcgatcccgagttgtggaaggcaatgcag
gatgaaaaccgtcgtcaggaagaccacattgagctgatcgcctcggaaaactataccagc
ccggcggtgatggaagcgcagggctcgcaactgaccaataaatacgccgaaggctatccc
ggcaagcgctattacggtggctgcgagtacgtggatgtggccgaacagctggcgatcgac
cgggtcaaggccctgttcggcgcggaatatgccaacgtccagccgcactccggttcccag
gccaaccaggcggtatacatggcggtgctgaagcctggcgacactattttgggcatgtcg
ctggctcatggcggtcacctcacccacggtgcttcggtgaatctttccggcaaactcttc
aatgcaatcacctacggcctggaccccaaaaccgaagcgattgattacgacgaagtggag
cgcctggctctggagcacaagccgaaaatgatcgtagccggtgcttcagcttattctctg
atcatcgactggaaacgcttccgcaagatcgccgacatggttggtgcctatctgtttgtc
gatatggcgcattacgccggtctggtcgctgcgggcctgtaccccaacccggtcgggatc
gcagattttgtgaccagcactacccacaagaccctgcgtggcccgcgcggcggcatcatc
ctgtcctccttgcagcacgagaaggcgctgaactcggcgatttttcccagtatccagggc
ggcccgctgatgcacgtgattgccgccaaggcggtcgcgttcaaggaagcggcgacgaaa
gaattcaagcactaccaggagcaggtgatcgaaaacgctatcgtgatggccaaggtgctg
caggagcgtggtttgcgcatcgtttccgggcgcaccgaatcgcatgtgttcctggttgac
ctgcgcgccaagaacctgaccggcaaagaagccgaagcggcgctgggcctcgctcacatc
actgtgaacaaaaatgccatcccgaacgacccgcagaaacccttcgtcaccagcggcatc
cgcatcggcacgccggcgatgaccacgcgtggtttcaaggaaatcgaagcggagcacctc
gccaacctgatcgccgacgttctcgacgcacccaccgacgaggttgtcatcagccgcgtg
gcgaatgaggccaaggcgatgtgcgcgaagttccccgtttacggaaagtga
DBGET
integrated database retrieval system
