Sulfuricella denitrificans: SCD_n00879
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Entry
SCD_n00879 CDS
T02857
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sdr
Sulfuricella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdr03016
]
SCD_n00879 (truA)
Enzymes [BR:
sdr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SCD_n00879 (truA)
Transfer RNA biogenesis [BR:
sdr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SCD_n00879 (truA)
Prokaryotic type
SCD_n00879 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BAN34720
UniProt:
S6A9U5
LinkDB
All DBs
Position
884637..885422
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AA seq
261 aa
AA seq
DB search
MRIALGLEYDGSHFCGWQSQLSGCGVQDILERALSGIAGEPLRVVTAGRTDTGVHALHQV
VHFDTDVTRPDSAWVRGVNALLPDSVGVLWAQPVSDEFHARFSAVSRSYRYLLLNHPVRP
VLLSGKVGWFHQPLDVEAMRQGAQFLLGEHDFSAFRAAECQAKSPIKHLQKIEIATSGKV
ILFDFTANAFLHHMVRNLVGSLVYVGKGKHSPAWMLELLENRNRIHSAPTFAPDGLYLAG
IGYDPKWAIPNLSRMPNFAFG
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcgcgctcggcctggaatatgacggcagtcatttctgtggctggcaaagccag
ctttccggctgtggcgtgcaggatatactggagcgagcactctccggcatcgccggtgaa
cctcttcgtgtggtgactgcggggcgaaccgatactggcgtgcacgcgctgcatcaggtc
gtccattttgatactgatgtgacaaggccggacagtgcctgggtacgcggcgttaatgct
ctgctgccggacagtgtcggcgtactgtgggctcagccggtgagtgacgagttccacgca
cgtttcagcgcggtatccagaagctaccgctatttgctgctcaaccacccggtacgtcca
gttctactttccggcaaggtgggctggtttcaccagccgctggatgttgaggcgatgcgg
cagggagcccagttccttttgggagagcatgatttctccgctttccgcgccgctgagtgc
caagccaagtcgccgatcaagcatttacaaaaaatagagatagcaaccagcggtaaggtg
attctgttcgacttcaccgccaatgcctttctccaccacatggtgcgcaatctggtcggc
agtctggtctatgtcggtaaaggcaaacactcacccgcctggatgctggaactattggaa
aatcggaaccgcatccattccgcacccaccttcgcgccggatggtttgtatctggctggc
attggatacgatccgaaatgggctattccgaatctttcgaggatgccgaattttgcgttt
ggctaa
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