Sulfuricella denitrificans: SCD_n01186
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Entry
SCD_n01186 CDS
T02857
Name
(GenBank) family 3 extracellular solute-binding protein
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
sdr
Sulfuricella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdr01011
]
SCD_n01186
Enzymes [BR:
sdr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
SCD_n01186
Peptidoglycan biosynthesis and degradation proteins [BR:
sdr01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
SCD_n01186
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_3
SLT
Lig_chan-Glu_bd
Phosphonate-bd
Tom7
Motif
Other DBs
NCBI-ProteinID:
BAN35016
UniProt:
S6AG96
LinkDB
All DBs
Position
complement(1201810..1203300)
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AA seq
496 aa
AA seq
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MNHETWTKSQKKVKLLTMRLFIPLILALGMGSCSIPEAPIPPVQENHELVVLTRNSPTTY
YEDAQGNYAGLEYDLVKLFAQELGVDVRFVVATEFSKIIPLLTKKQVHLVAAGLTITPER
KKIIRFGPAYQTVQQQIVYNTFALKPDGIEDLIGKRIEVIAGSSYVERLKQAKKKAPKLA
WHEISTTEIEELLEKVANGEVDYSVADSHFVSMTQNFFPNLGVAFNLGEPEQLAWAFPKD
VDPYLYGKAQQFFDRIQKDGTLRRLLDRYYGHIDRLNRIDVATFLEKMNSTLPSYRKLFQ
QAQEITDIDWRLIAALGYQESHWNPLATSPTGVRGLMMLTSDTADYLDVNDRLNPKENVS
AGARYLLALKEALPERIPEPDKTWMALAAYNAGMGHLEDARILAQRMKLNPDSWTDMKKA
LPLLSKTAYHTTLKHGYARGGESVILVENIRNYHNIMMKFEPAYNSPYPVLTSAKREHSL
AESPEHPDKKVTLKAQ
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
ttgaaccatgaaacatggacaaaatcacaaaagaaggtcaaacttttgaccatgcgcctg
tttattccgctcatccttgcgctgggaatggggtcgtgcagcattccagaggctcccatc
ccgccggtgcaggaaaaccacgaattggtggttctgacccgcaatagccccaccacctat
tatgaggatgcacaaggcaattatgccgggttggaatacgacctggtcaaactgttcgcc
caagaactcggcgtcgatgtccgtttcgtcgtcgccaccgagttcagcaaaatcatcccc
ttactgaccaagaaacaagtacatctagttgccgcagggctaaccatcactccggaacga
aaaaaaatcatccgttttggccctgcctatcaaaccgttcagcagcaaatcgtttacaac
actttcgctttgaagcccgacggcattgaggatttgatcggaaaaagaatcgaggtcatc
gccggtagcagctatgtggaaaggctcaagcaagccaagaaaaaagcccccaagctggcg
tggcatgaaatcagcaccacggaaatagaagaattgctggagaaagtggcgaatggcgag
gtggactattccgtcgccgattcccatttcgtttccatgacacagaatttctttcctaat
cttggcgttgccttcaacctgggcgaaccggagcaattggcctgggcatttccgaaagac
gtcgatccctacctgtacggcaaggcccagcaatttttcgaccgcatccagaaagacgga
acgctgcggcgcctgctcgatcgctactacggccacatcgaccgtctgaaccgcatcgac
gtggctaccttcctggaaaaaatgaattcgaccttgccgagctaccggaaactgtttcag
caggcgcaggaaatcaccgatatcgattggcggcttattgccgccctgggttaccaggaa
tcacactggaatcccctggccacttcgccgacgggggtgcgaggcctgatgatgctgacc
tcggacacggccgactacctggacgtcaacgatcggctcaatccgaaagaaaatgtttct
gcgggggcccgctaccttctcgcactgaaagaagctctgccggaacggattcccgagcca
gacaagacctggatggctctggccgcctacaacgcggggatgggccacctggaagacgcg
cggattctggcacagaggatgaaattgaacccggactcctggaccgacatgaaaaaagcc
ctgccgctacttagcaaaaccgcttaccacaccactctcaagcacggctatgcacgtggc
ggcgaatcagtaattctggtggaaaacatccgcaactatcacaacatcatgatgaaattt
gaacctgcctataattctccatatccggtactgacctccgccaagagggaacacagtctt
gccgaatctccagagcacccagataagaaagtaacgctgaaggcacagtaa
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