Sulfuricella denitrificans: SCD_n01225
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Entry
SCD_n01225 CDS
T02857
Name
(GenBank) two component sigma-54 specific Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
sdr
Sulfuricella denitrificans
Pathway
sdr02020
Two-component system
sdr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SCD_n01225
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SCD_n01225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sdr02022
]
SCD_n01225
02035 Bacterial motility proteins [BR:
sdr02035
]
SCD_n01225
Two-component system [BR:
sdr02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
SCD_n01225
Bacterial motility proteins [BR:
sdr02035
]
Flagellar system
Flagellar assembly proteins
Others
SCD_n01225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
HTH_30
Mg_chelatase
AAA_19
Xre-like-HTH
HTH_28
AAA_3
FleQ
HTH_23
ATPase
AAA
AAA_16
nSTAND3
HTH_1
Motif
Other DBs
NCBI-ProteinID:
BAN35054
UniProt:
S6AKC1
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All DBs
Position
1244177..1245511
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AA seq
444 aa
AA seq
DB search
MKTLPILIVEDDRDLREALCDTLGLAGYETLDASDGLAALAVLGKRRVGLVVTDVQMHPM
DGHTLLREIKSVYPDVPVLLMTAYGMIDKAVEAMRAGACTYLTKPFEPDSLLAEVARYML
SAQPANGSEMAAEDPRMVELLGLARKVAATSATILVTGESGCGKEVMARFIHINSPRADK
PFVAINCAAIPENLLESTLFGYEKGAFSGAAQSHAGKFEQAQGGTLLLDEVSEMPMPLQA
KLLRVLQEREVERVGGHKAIPLDIRIIATSNRDMGEVVARGNFREDLYYRLNVFPLELPP
LRERPLDIVPLARYLIGRLSGALGRPGIGLSAAAAEQLTQYAWPGNIRELENVIQRAMIL
SPSDMLETEYLLLPKSGLAVPQAGKAVAAGVAVDMKTLERTHILEILASVSGSRKRAAEK
LGMSERTLRYKLQQYREESEETGQ
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacactgcctatcctgatcgttgaggacgaccgagacttgcgcgaagcattgtgc
gacacgctgggtctggccggctacgagacgctggatgcttccgatggactggcggcgctt
gcggtgctgggtaagcgcagggtcggcctggtcgtgacggatgtacagatgcaccccatg
gatgggcatactcttttacgcgaaatcaagtcagtctatcctgatgtcccggtactactg
atgactgcctatggcatgatcgacaaggcggtggaagcgatgcgcgcaggggcgtgtact
tacctgactaagccattcgagccggacagtctgttggcggaggtggcgcgttatatgctt
tctgcacaaccggcgaacggctctgaaatggcggctgaagatcctcgcatggtcgagttg
ctggggttggcacggaaggttgccgctaccagtgcgacgatactggttacgggcgagtcc
ggttgcggtaaggaggtgatggcgcgtttcatccacattaacagtccacgtgccgacaag
cctttcgtggcgataaactgcgcggcaattccggaaaacctgctcgaatccactttattc
ggttacgaaaaaggcgcctttagcggcgcggcccagtcccatgcgggcaagtttgagcag
gcgcaaggaggtaccctgttgctggatgaggtatccgaaatgccgatgccgctccaggcc
aagctgttgcgggtgttgcaggagcgcgaggtggagcgtgtcggcgggcataaggcgatt
ccactcgatatcaggatcattgccacctccaatcgcgatatgggcgaggtagtggcgcgc
ggtaactttcgtgaggatttgtattatcgcctcaacgtgtttcctctggaattgccgccg
ttgcgtgagcgtccgctggatatcgtgccgttagctcgatatctgattggccgcttgagc
ggcgcgctgggccggcccggaatcggcttgtctgctgcggctgccgagcaattgacgcaa
tatgcctggccgggtaacatcagggagcttgaaaacgttattcagcgtgccatgattttg
tcgcccagcgatatgctggagacagagtatttgcttctgcccaaatctggactggctgtg
ccgcaagctgggaaagcggtcgctgccggagtagcggtggatatgaaaacgctggagcgg
acgcatattctggagatcctggcttcagtcagcggttcgcgtaagcgtgccgcggaaaag
ctgggcatgagcgagcgtaccttgcgttacaagctgcaacagtaccgtgaagaaagtgaa
gaaacgggccaatga
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