Sulfuricella denitrificans: SCD_n01266
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Entry
SCD_n01266 CDS
T02857
Name
(GenBank) sigma 28 (flagella/sporulation)
KO
K02405
RNA polymerase sigma factor FliA
Organism
sdr
Sulfuricella denitrificans
Pathway
sdr02020
Two-component system
sdr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SCD_n01266
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SCD_n01266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdr03021
]
SCD_n01266
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sdr02035
]
SCD_n01266
Transcription machinery [BR:
sdr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCD_n01266
Bacterial motility proteins [BR:
sdr02035
]
Flagellar system
Flagellar assembly proteins
Stator
SCD_n01266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
Rv2175c_wHTH
GerE
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
BAN35095
UniProt:
S6AA20
LinkDB
All DBs
Position
1281854..1282564
Genome browser
AA seq
236 aa
AA seq
DB search
MYAKTGLEKNQYVVQYAPLVKRIAYHLMARLPASVQVDDLIQVGMIGLLDAVSNYDDTQG
AQFETYAVQRIRGAMLDELRQCDWLPRSARKTLRQIETAMNAMEQRVCRAPTEREVADEL
QVSLDDYQQMLLDARGCQLLHYEDLQSSEGEDFFERHCADDSAEPLAKLQDGRFREKLIE
AISLLPEREKLMMAMYYEEELNLREIGEVLGVSESRVCQLHSQAMARLRSKLKEWL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtacgctaaaaccggactggagaaaaatcaatatgtcgtccaatatgctccgctggtc
aagcgcattgcctatcatctgatggcgaggctgcctgccagcgtgcaggtcgacgacctg
attcaggtgggaatgattggcctgcttgatgcggtgagcaattatgacgacacgcagggc
gcgcagtttgagacctatgccgtgcagcgtatccgcggtgcaatgctggacgaattgcgg
caatgcgactggctgccgcgctcggcgcggaaaacgctacgtcagatcgaaaccgcaatg
aatgcaatggagcagcgcgtgtgccgcgctccgaccgagcgtgaggtggctgatgagtta
caggtcagtctggatgactaccagcagatgttgctggacgcgcgtggttgccagttgctg
cattatgaggacttgcaaagcagcgagggtgaggactttttcgagcgccactgtgccgac
gattctgccgaacctttagccaaactgcaggacggaagattccgggaaaaactgatcgag
gcaatcagcctattgccagagcgcgagaagctgatgatggcgatgtactatgaggaagag
ctgaatttgcgtgaaatcggtgaggtgttgggcgttagcgaatcgcgcgtgtgtcagttg
catagccaagccatggcacgcttgcgcagcaagctgaaggaatggctgtga
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