KEGG   Sulfuricella denitrificans: SCD_n01399
Entry
SCD_n01399        CDS       T02857                                 
Symbol
rnc1
Name
(GenBank) ribonuclease III (RNase III)
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
sdr  Sulfuricella denitrificans
Pathway
sdr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:sdr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SCD_n01399 (rnc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdr03019]
    SCD_n01399 (rnc1)
   03009 Ribosome biogenesis [BR:sdr03009]
    SCD_n01399 (rnc1)
   03036 Chromosome and associated proteins [BR:sdr03036]
    SCD_n01399 (rnc1)
Enzymes [BR:sdr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     SCD_n01399 (rnc1)
Messenger RNA biogenesis [BR:sdr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SCD_n01399 (rnc1)
Ribosome biogenesis [BR:sdr03009]
 Eukaryotic type
  90S particles
   RNase
    SCD_n01399 (rnc1)
 Prokaryotic type
  rRNA processing factors
   SCD_n01399 (rnc1)
Chromosome and associated proteins [BR:sdr03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     SCD_n01399 (rnc1)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: BAN35225
UniProt: S6AA46
LinkDB
Position
1408589..1409263
AA seq 224 aa
MGTEALVRRIGYEFKDPALLRRALTHRSYGMPHNERLEFLGDSVLSCAIATHLYHLHTRV
QEGDLSRMRAHLVKELTLSEIASSLNLGDCLKLGEGELKSGGFRRPSILADTLEAIIGAV
YLDGGFASAEQMIARLFEPLMKGLDPKTLGKDPKTLLQEYLQGRKLPLPSYTVLSISGEA
HEQHFEVECAIPDLGVRACGGGVSRRSAEQQAAGSVMQILNSEG
NT seq 675 nt   +upstreamnt  +downstreamnt
atgggtactgaagcgctggttcggcggatcggctatgagttcaaggatccggcgttgttg
cgcagggcactgacccaccgcagttacggtatgccgcacaacgagcggctggaatttctc
ggtgacagcgtgctgagttgcgctatcgccacgcatctatatcatctccatacccgcgtg
caggaaggcgatttgagccggatgcgcgcccatctggtcaaggaactgacgctctctgaa
atcgcctcctccctgaatttgggcgattgcctgaaactgggggaaggagagctgaaaagt
ggtggctttcgccgcccctctatccttgcggacacgttggaagcgattatcggcgcggtt
tacctcgatggcgggtttgccagcgcggaacaaatgattgcaaggctattcgagccgctg
atgaaggggctcgacccgaagactctgggcaaggatcccaaaaccctgctgcaggaatat
ttgcagggccgcaagctgcctttgcccagttacactgtgttgtcgatcagtggcgaagcc
cacgagcagcacttcgaagtagagtgcgccattcctgacctgggtgtacgtgcctgcggc
ggaggggttagccgccgaagcgcggagcaacaggctgctggcagcgtcatgcaaatactt
aatagtgaggggtga

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