Sulfuricella denitrificans: SCD_n01399
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Entry
SCD_n01399 CDS
T02857
Symbol
rnc1
Name
(GenBank) ribonuclease III (RNase III)
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sdr
Sulfuricella denitrificans
Pathway
sdr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SCD_n01399 (rnc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdr03019
]
SCD_n01399 (rnc1)
03009 Ribosome biogenesis [BR:
sdr03009
]
SCD_n01399 (rnc1)
03036 Chromosome and associated proteins [BR:
sdr03036
]
SCD_n01399 (rnc1)
Enzymes [BR:
sdr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SCD_n01399 (rnc1)
Messenger RNA biogenesis [BR:
sdr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SCD_n01399 (rnc1)
Ribosome biogenesis [BR:
sdr03009
]
Eukaryotic type
90S particles
RNase
SCD_n01399 (rnc1)
Prokaryotic type
rRNA processing factors
SCD_n01399 (rnc1)
Chromosome and associated proteins [BR:
sdr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SCD_n01399 (rnc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
BAN35225
UniProt:
S6AA46
LinkDB
All DBs
Position
1408589..1409263
Genome browser
AA seq
224 aa
AA seq
DB search
MGTEALVRRIGYEFKDPALLRRALTHRSYGMPHNERLEFLGDSVLSCAIATHLYHLHTRV
QEGDLSRMRAHLVKELTLSEIASSLNLGDCLKLGEGELKSGGFRRPSILADTLEAIIGAV
YLDGGFASAEQMIARLFEPLMKGLDPKTLGKDPKTLLQEYLQGRKLPLPSYTVLSISGEA
HEQHFEVECAIPDLGVRACGGGVSRRSAEQQAAGSVMQILNSEG
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgggtactgaagcgctggttcggcggatcggctatgagttcaaggatccggcgttgttg
cgcagggcactgacccaccgcagttacggtatgccgcacaacgagcggctggaatttctc
ggtgacagcgtgctgagttgcgctatcgccacgcatctatatcatctccatacccgcgtg
caggaaggcgatttgagccggatgcgcgcccatctggtcaaggaactgacgctctctgaa
atcgcctcctccctgaatttgggcgattgcctgaaactgggggaaggagagctgaaaagt
ggtggctttcgccgcccctctatccttgcggacacgttggaagcgattatcggcgcggtt
tacctcgatggcgggtttgccagcgcggaacaaatgattgcaaggctattcgagccgctg
atgaaggggctcgacccgaagactctgggcaaggatcccaaaaccctgctgcaggaatat
ttgcagggccgcaagctgcctttgcccagttacactgtgttgtcgatcagtggcgaagcc
cacgagcagcacttcgaagtagagtgcgccattcctgacctgggtgtacgtgcctgcggc
ggaggggttagccgccgaagcgcggagcaacaggctgctggcagcgtcatgcaaatactt
aatagtgaggggtga
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