Sulfuricella denitrificans: SCD_n01550
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Entry
SCD_n01550 CDS
T02857
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
sdr
Sulfuricella denitrificans
Pathway
sdr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SCD_n01550 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdr03400
]
SCD_n01550 (uvrB)
DNA repair and recombination proteins [BR:
sdr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCD_n01550 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SCD_n01550 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
Kinesin
AAA_22
HEM4
Motif
Other DBs
NCBI-ProteinID:
BAN35372
UniProt:
S6B411
LinkDB
All DBs
Position
complement(1562030..1564045)
Genome browser
AA seq
671 aa
AA seq
DB search
MIVTFPNSPYKLHQPFEPAGDQPNAIAQLVEGLNDGLAFQTLLGVTGSGKTFTMANVIAQ
LGRPAIVMAHNKTLAAQLYSEMREFFPENAVEYFVSYYDYYQPEAYVPSRDMFIEKDSSI
NEHIEQMRLSATKSLLEREDCVIVASVSCIYGIGDPVDYHGMILHLRQGETMSQRDAIKR
LTEMQYDRNEIDFRRGTFRVRGDVLDIYPAESAETAVRVSLFDDEVESISLFDPLTGHIQ
RKVPRYTVYPSSHYVTPRSTTLRAIEAIKLELRERIEFFQKEHKLVEAQRIEQRTRFDLE
MLNELGFCKGIENYSRHLSGRNPGDPPPTLIDYLPPNALMFLDESHVTIPQIGGMYKGDR
ARKENLVGYGFRLPSALDNRPLRFDEFEKVMRQSIFVSATPADYEAQHAGQVVEQVVRPT
GLVDPKIEVRPATNQVDDLLSELNARIALGERVLVTTLTKRMAEDLTDYLSDHGIKVRYV
HSDIDTVERVEIIRDLRLGVFDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSERALI
QTIGRAARHINGTAILYGDKITNSMRRAMDETERRRAKQVAHNTAHGITPRGVTKRIKDI
IDGVFDIDTAQKELKVAQELAAYKHLDEKKLTKEIKQLEKEMLACARNLEFERATQLRDK
LNQIKALMFKT
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgtcacatttcccaatagcccctacaaacttcaccagccgtttgagcccgccggg
gatcagcccaatgccatcgcacagttggtcgaaggcctgaacgacgggctggcgttccag
accttgctcggtgtgaccggctccggcaagaccttcaccatggccaatgtcatcgcccaa
cttggccgaccagccattgtcatggcgcacaataagactctggcggcgcaattgtattcc
gagatgcgcgagttctttccggaaaacgcggtggaatattttgtttcctattacgattat
taccagccggaagcctatgttccgtcgcgtgatatgttcatcgaaaaagactccagcatc
aacgagcacatcgaacagatgcggttatccgccaccaaatctttgctggagcgtgaggat
tgcgtgatcgtcgcctcggtttcgtgcatttacggtatcggcgatccggtggattaccac
ggcatgattctgcatctgcgccagggcgagacgatgtctcagcgcgatgccatcaagcgc
ctcaccgagatgcagtacgaccgcaacgagatcgattttcgacgcggcacctttcgtgtg
cgcggtgatgtgctcgacatctatccggcagaaagcgcggaaacagcggtgcgggtcagt
ttgttcgatgacgaagtcgagagtatttctttgttcgacccgctgaccggccatattcag
cgcaaggttccgcgctatacagtttacccgtcaagccattacgtcacgccacgcagtacc
acgctgcgggcgatcgaggcgatcaagctggaattgcgcgagcgcatcgagtttttccag
aaagagcataaattagtggaagcgcagcggatcgagcagcgcacccgcttcgacctggaa
atgctcaacgagttggggttctgcaagggcatcgaaaactactcgcgccatctgtccggc
aggaatccgggcgatccgccgcccacactgatcgactatctgccacctaacgcactgatg
ttcctagacgaaagccatgtcaccatcccgcaaatcggcggcatgtacaagggtgatcgg
gcgcgcaaggaaaatctggtgggatatggtttccgtctgccctctgcactcgataaccgg
cccctgcgcttcgacgagttcgaaaaggtgatgcggcagtccattttcgtttccgctacg
cctgctgattacgaggcgcagcatgcgggccaagtggtcgaacaagtggtgaggccaacc
gggttagtcgatccgaagatcgaagtccgcccggcaaccaaccaggtggacgatctgctc
tccgaactcaacgcccgaattgcgctaggcgagcgcgtgctggtcactactctgaccaag
cgcatggccgaggatttgaccgactatctgtctgatcatggaatcaaggttcgctacgtg
cactcggacatcgacacggttgaaagggtcgagatcatccgcgacctgcgactgggggtg
ttcgatgtgctaattggaattaacttgttgcgagaaggccttgatattccagaggtatcg
ttggttgcaattctggacgccgacaaggagggcttcttgcgttccgaacgtgcgctgatc
cagaccataggaagggcggcacgtcacattaatggcaccgcgattctctatggcgacaaa
atcactaattccatgcgccgggcgatggacgaaacagagcgacgccgggctaagcaggtt
gcccataacaccgctcacggcatcacgccgagaggggtcaccaagcgtatcaaggacatc
atcgatggcgtgttcgatatcgacaccgcccagaaggaactgaaagtcgctcaggagctt
gctgcctacaagcacctggacgagaagaagctgaccaaggaaatcaagcaactggaaaaa
gaaatgctggcttgcgcccggaatcttgagttcgaacgtgccacgcagctacgcgacaaa
ttgaatcagattaaggcgctgatgtttaaaacgtaa
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