Sulfuricella denitrificans: SCD_n02275
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Entry
SCD_n02275 CDS
T02857
Name
(GenBank) RNA-binding S4 domain-containing protein
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
sdr
Sulfuricella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdr03009
]
SCD_n02275
Enzymes [BR:
sdr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
SCD_n02275
Ribosome biogenesis [BR:
sdr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SCD_n02275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S4
Motif
Other DBs
NCBI-ProteinID:
BAN36083
UniProt:
S6AD18
LinkDB
All DBs
Position
complement(2314788..2315510)
Genome browser
AA seq
240 aa
AA seq
DB search
MTEPVRLAKRLAELVPCSRREAELYIVGGWVMVDGQVVEEPQFKVSQQKVELHPDASLAP
IEPVTILLHLPPGHDAGMGDGFVQSLLTADSRAADDLSGIPMLKQHFAQLTPTTPLEANA
SGLLVFTQDWRVARKLLDDAATVEQEVIVEVAGEMGPDGLKRLNHKLSINGRSLPPAKVS
WQNETRLRFALKGAQPGQIAHMCNSVGLKVLTMKRIRIGRVSMAKLPPGQWRYLAPHERF
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacccgttcgcctcgcaaaacgccttgccgaattagtcccctgctctcgccgg
gaggccgagctttatatcgtgggcggctgggtaatggtggatgggcaagtggtggaagaa
ccccagttcaaggtgtcgcagcagaaggttgagcttcaccccgacgccagtcttgcaccg
attgagccggtaaccatcttgctgcacttgccgcccggccatgatgcaggcatgggtgac
ggtttcgtacagtctctgcttaccgccgactctcgggcggctgacgacctctccggcatc
cccatgctcaagcaacactttgcacagctgaccccgaccacgccgttagaggcgaacgcc
agcggcttgctggtatttacccaggactggcgagtagcgcgcaagctgctcgacgatgcc
gccaccgtagagcaggaggtcatcgttgaggttgctggcgaaatggggcccgatgggctc
aagcgtctcaatcacaagctcagtattaatggccggtcgctgcccccggccaaagtcagc
tggcaaaatgaaacccgcctgcgcttcgctctcaagggtgctcaacccggccagattgct
catatgtgcaacagtgttgggctaaaggtgctgaccatgaagcggatcaggatcgggcgg
gtgtcgatggccaaattgccgcctgggcaatggcgttatttggcaccgcatgagaggttt
taa
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integrated database retrieval system
