Sulfuricella denitrificans: SCD_n02393
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Entry
SCD_n02393 CDS
T02857
Name
(GenBank) putative glycosyltransferase
KO
K12990
rhamnosyltransferase [EC:2.4.1.-]
Organism
sdr
Sulfuricella denitrificans
Pathway
sdr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCD_n02393
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sdr01005
]
SCD_n02393
Lipopolysaccharide biosynthesis proteins [BR:
sdr01005
]
O-antigen repeat unit
SCD_n02393
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_trans_2_3
Glyco_tranf_2_3
Glyco_transf_21
Gly_reductase
Motif
Other DBs
NCBI-ProteinID:
BAN36201
UniProt:
S6AIW5
LinkDB
All DBs
Position
2435259..2436161
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AA seq
300 aa
AA seq
DB search
MPFHAFPPEVAAEAVCAVVVAYFPDDGFVERLKTLIPQVGKLVVVDNTPTQGCAQQIMAL
GESDGRIHLIENHRNAGVAAALNQGLEHALQIGCKWLLTLDQDTWCYPDMVTSLLQVHEA
CKPKAAVIGGNYFDAQNHQLKVPADGETECLEQKTVITSGSLVDVGVARAVGGFREDYFI
DQVDHEFCLRVRAHGYRVVISRKPVMEHSVGRPGGAWLPLLGILPNHPPLRKYYIARNTV
VTVVEYWRREPDWCLRRSVRLLLGLLLMSTLEKQRLAKVRAFAAGFMDGVRRRMGPCWRE
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
ttgcccttccatgcattccccccggaagtagccgcagaagccgtgtgcgcggtggtggtg
gcgtattttccagacgatggattcgtggagcgtttgaaaaccctcatcccccaggtcggt
aagctggtggtggtggacaatacaccgactcagggatgcgcgcagcaaatcatggcgctt
ggggagagcgatgggcggattcatctcatcgagaatcatcgcaacgcgggcgtcgcggcg
gccttgaaccagggcctcgaacatgcgttgcagatcggctgcaaatggctgcttaccctc
gaccaggatacctggtgctaccccgatatggtgacatccttgctccaagtccacgaggcc
tgcaagcccaaagccgcggtgatcggcggcaactatttcgatgcccagaaccatcaatta
aaggtccccgccgacggagagacggaatgcctggaacagaaaacggtcatcacctccggt
agcctggtcgatgttggtgtggccagggcggtgggaggctttcgtgaggactatttcatc
gaccaggtggatcatgaattctgcttgcgcgtacgcgcccacggctatcgggtggtaatc
agccgcaagccggtgatggaacacagcgtaggcagaccggggggggcatggttgccactt
ctcggcatcctgcccaatcacccgccgctacgaaagtactacattgcccgcaataccgtg
gtgacagtggtggaatactggcgacgggagcccgactggtgcctgcgccggtcggttcgc
ctgctgttggggctgctcttgatgtccactctggaaaaacagcgcctcgccaaggttcgc
gctttcgcagccggattcatggatggtgtgcgacgccgcatggggccgtgctggcgagaa
tag
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