Sulfuricella denitrificans: SCD_n02917
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Entry
SCD_n02917 CDS
T02857
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase domain protein
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
sdr
Sulfuricella denitrificans
Pathway
sdr00540
Lipopolysaccharide biosynthesis
sdr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SCD_n02917
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sdr01005
]
SCD_n02917
Enzymes [BR:
sdr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
SCD_n02917
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
SCD_n02917
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
SCD_n02917
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
SCD_n02917
Lipopolysaccharide biosynthesis proteins [BR:
sdr01005
]
Lipid A
SCD_n02917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Glyco_trans_1_4
Motif
Other DBs
NCBI-ProteinID:
BAN36716
UniProt:
S6AK31
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Position
2979572..2980825
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AA seq
417 aa
AA seq
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MMRRLYTLLLYLLLPYILFHLLWRSRRQPGYLRHIGERFGFYRGQPATPLIWLHAVSVGE
TRAAVPLVTQLQARYPEHRILLTHMTPTGRDTGRQLFGDQVLQCYLPYDFPIATRRFLRH
FKPEIGLLMETEIWFNLVQICKKTGVPLLLVNARMSEKSARKYGRFKTLTRDSLQSLSVI
AGQTEADARRLVELGAPSVNITGNLKFDIAVPQSAISLGKNLREQFGAVRPVFLAASTRE
GEEVLIIEALARIDIPNLLIVIVPRHPQRFDQVADMLTQRDIRFQRRSANQVVAPETQVV
LGDSMGEMFSYYATCDIAFIGGSLLPLGGQNLIEAAAMGKPILIGPHTFNFSEVTELAVQ
AGAAQRVANAEELALMVRDLLKTPERMKAMSVTALTFADRHRGATERLMTLIEPCIS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgccgcttatacaccctgctactgtatctcttgttgccttacattctgttccat
ctgttatggcgatcccggcgccagcccggctacctgcgtcatatcggtgagcgttttggt
ttttatcgcggccagccggctaccccactgatctggctgcacgcggtatcggtgggagag
actcgcgccgcagtgccgctggttacccaattgcaggcacgttatccagaacaccgtatc
ctgctcacccacatgacacccactggccgggataccggcaggcagttgttcggcgatcaa
gttctgcaatgctatctgccctatgattttccgattgcgacaaggcgctttcttcgtcac
ttcaagcccgaaatcgggctgctgatggaaaccgaaatctggttcaacctggtacagatc
tgtaagaaaaccggggtgccgctactacttgtcaacgcgcggatgtcggaaaaatcggcg
cgcaaatatggccgtttcaaaacacttactcgtgacagcctgcaatcactttcggtaatt
gcaggccaaaccgaggcagatgcaagacgattggtggaattaggcgcaccttccgtgaat
attaccggcaacctcaagttcgatatcgccgtaccacaaagcgcgatctcccttggaaaa
aacctgcgggaacaattcggagctgtacgcccggtgtttcttgccgccagcacacgggaa
ggcgaggaagtgctgattattgaagcgctagccagaatcgacatccccaacctgctcatc
gtcatcgtgccgcgccatccgcaacgcttcgaccaggtggcggatatgctgacgcaacgc
gacatccgcttccagcgccgttcggcaaaccaagtcgttgccccggaaacccaagtagtg
ttgggcgacagcatgggggagatgttctcctattacgctacctgcgatatcgctttcatc
ggcggcagcctgctgccgctcggtggccagaatctgattgaggcggcagcgatgggcaag
ccgattttgatcggcccgcacactttcaacttttcggaagtaaccgaacttgccgttcag
gctggcgctgcgcaacgcgtggctaatgccgaggagttagcattaatggtcagggatttg
ctgaaaacaccggagagaatgaaagccatgtcggttacggcgctgacttttgccgaccgg
catcgcggcgcaacggaacgactgatgacgctgatcgagccttgtatcagctga
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