Sulfuricella denitrificans: SCD_n02920
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Entry
SCD_n02920 CDS
T02857
Symbol
thiC
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
sdr
Sulfuricella denitrificans
Pathway
sdr00730
Thiamine metabolism
sdr01100
Metabolic pathways
sdr01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SCD_n02920 (thiC)
Enzymes [BR:
sdr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
SCD_n02920 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
BAN36719
UniProt:
S6APA5
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All DBs
Position
2983145..2985016
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AA seq
623 aa
AA seq
DB search
MNANPIFLNLTASVDEAAVQPFANSRKVYVPGSRPDIRVPMREISLSDTPASMGAEKNPP
VYVYDTSGPYTDPDVKIDIRNGLPAIRAPWFEARGDTENLPGLSSAYGLNRLNDPSLAEM
RFNLHRTPRRAKAGMNVSQMHYARKGIITPEMEFVAIRENQRRDNLSELVTRQHPGESFG
AAIPKIITPEFVREEIARGRAIIPANINHPELEPVIIGRNFLVKINGNIGNSALASSIHD
EVEKMVWGIRWGADTIMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVNGKAEDLN
WEIFRDTLIEQAEQGVDYFTIHAGVRLAYVPMTAKRMTGIVSRGGSILAKWCLAHHKENF
LYTHFEDICEIMKAYDVSFSLGDGLRPGSLYDANDEAQFAELITLGELTKIAWKHDVQTM
IEGPGHVPMHMIKENMELQLKHCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGCA
MLCYVTPKEHLGLPDKEDVRVGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWDD
QFNLGLDPDKAKEFHDETLPKDSAKVAHFCSMCGPHFCSMKITQDVRDYAAAQGVSENEA
LEKGMQEKSVEFLNTGAKLYQKA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaaccccattttcttgaacctgaccgccagtgtcgatgaggctgcggtacaa
cccttcgccaactcccgcaaggtatacgtaccaggttctcgccccgacatccgcgtaccg
atgcgcgaaatcagtctgtccgacaccccagccagcatgggggcagaaaaaaacccgccc
gtctacgtctatgacacctccggaccctacactgacccggacgttaaaatcgacatccgt
aatgggctgccggcaatccgcgcaccctggttcgaagcacgaggcgacactgagaatcta
cccggactgagctcggcttatggtctgaaccgcctgaacgacccctccctggcagagatg
cgcttcaacctgcaccgcaccccgcgccgcgccaaagccggcatgaatgtcagccagatg
cactacgcccgcaagggcatcatcacccctgaaatggaatttgtcgccatccgcgagaac
cagcgccgcgacaatctttccgaacttgtcacccgtcagcaccccggcgaaagtttcggc
gccgccattcccaaaatcatcacgcctgaattcgttcgtgaagaaattgcacgcggtcgc
gccattatcccggcaaacatcaatcacccagaactcgaacccgttatcattggccgtaat
ttcctggtcaagattaatggcaacattggcaactcggcgctggcttcttcgattcacgac
gaagtcgaaaaaatggtgtggggcatccgctggggcgccgataccatcatggacctctcc
accggcaaaaacatccacgaaacccgtgagtggattatccgcaacagcccggtgcccatt
ggcaccgtgccaatctatcaggcactggaaaaggtcaacggcaaggccgaagacctgaac
tgggaaatcttccgcgacactctgatcgaacaagctgagcaaggggtagattacttcacc
atacacgccggtgtaaggctcgcctatgtgccgatgaccgccaagcgcatgaccggtatc
gtctcgcgcggtggttccatcctcgccaagtggtgcctggctcaccacaaggaaaatttc
ctttatacccatttcgaagatatctgcgaaatcatgaaggcctatgacgtcagtttcagt
cttggggatggcctgcgtccgggttctttatatgatgccaacgacgaagcgcaattcgcc
gaactgatcactctgggagagctgaccaaaatcgcctggaagcacgatgtccagaccatg
atagaaggccctggccacgtgccgatgcacatgatcaaggaaaacatggagcttcagctt
aagcattgtgacgaagcgcccttttacactttgggaccactcaccaccgacattgccccc
ggctacgaccacatcacttccggcattggggccgccatgatcggctggtatggctgtgcc
atgctgtgctatgtcacacccaaagagcacctcggcctgccggacaaggaagacgtacgt
gtcggcatcattacctacaaaattgccgcccacgctgccgatctggccaaaggccaccca
ggcgcgcagattagagacaatgccctgtccaaagcgcgtttcgaattccgctgggatgac
cagttcaacctcggtctcgaccccgacaaagccaaggaattccatgacgaaaccctgccc
aaggattcggccaaggtcgcccacttctgctcgatgtgcggtccgcacttctgctccatg
aaaatcactcaggacgtgcgcgactatgcggccgctcagggcgtatccgagaatgaggcg
ctggagaagggaatgcaggaaaaatcagtggaattcttgaataccggcgcaaaactctac
cagaaagcctga
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