Sulfuricella denitrificans: SCD_n02940
Help
Entry
SCD_n02940 CDS
T02857
Name
(GenBank) penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
sdr
Sulfuricella denitrificans
Pathway
sdr00550
Peptidoglycan biosynthesis
sdr01100
Metabolic pathways
sdr01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SCD_n02940
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SCD_n02940
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sdr01003
]
SCD_n02940
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdr01011
]
SCD_n02940
Enzymes [BR:
sdr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
SCD_n02940
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SCD_n02940
Glycosyltransferases [BR:
sdr01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
SCD_n02940
Peptidoglycan biosynthesis and degradation proteins [BR:
sdr01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
SCD_n02940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Homeobox_KN
Motif
Other DBs
NCBI-ProteinID:
BAN36739
UniProt:
S6APC4
LinkDB
All DBs
Position
complement(3008517..3010850)
Genome browser
AA seq
777 aa
AA seq
DB search
MSSRWWRYPLLAFLALGFVFSAAIMLAGILAYPDLPSLEVLTDYRPKIPLRVYTTEGALI
GEFGEERRALIKIGDVPKPMKLAILAAEDDRFYSHGGIDYMGVLRAALANLTAGGAREGA
STITMQVARNFFLSGEKTLTRKFSEVLLALKIEHYLSKDQILELYVNQIYLGQRAYGFSA
AAQTYFGRPLERLTVAEAAMLAGLPKAPSRYNPVVNPKRAKIRQHYVLRRMHDLKYITDA
EYQAALAQPLAVKREVHNVEVNADYVAEMVRQAMFERYQEAIYSSGMKVYTTLRKVDQEA
ANQALRQGVLDYDRRHGYRGPESFVDLPVRAANLEELLEDALADADTSNGLVPAIVLEAS
LKQVKCYIKGGETVQISNEGLKFVLKTLSDNASPKTRLRRGALIRVQKDDKSGWQILQRP
QIESALVSVVPQDGAIRALVGGFDFNRSKFNHVMQAWRQPGSSFKPFIYSAALEKGLTAA
TVINDAPIVVDAAQTGGQVWEPKNYENDYDGPMRLRTALTKSKNLVSIRVLQSIGPSYAQ
DYITRFGFSPEQHPPYLTMALGAGSVTPMQMAAAYSVFANGGYRTQPYLIDRIVDARGTL
LVQAKPKRAGDDAERVIDARNAFIMTSIMRDVVRFGTGARAMQLKRQDLAGKTGTTNDQV
DAWFTGFNPGLVAIAWIGFDQPRSMGGSETGAQAALPIWMGYMGKVLKGVPEVDLVIPEG
VATVKINPQSGHRVPDGSEGILEYFYQENVPAEQTGFFEGLFGGGGKSAEEVKDQLF
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacgttggtggcgatatccgctgttggcctttttggctttaggttttgttttt
tctgccgcaatcatgctggcgggaattttggcttaccctgacctcccctcactggaggtg
ctgaccgattaccggcccaaaatccctctgcgcgtttatacgacggagggtgcgttaatt
ggcgagtttggcgaggagcggcgtgcgctaatcaagattggggatgtgcccaagccgatg
aagctggcgattcttgctgctgaggacgaccggttctatagtcatggcgggatagattac
atgggggtgctgcgcgccgccctggctaatctgaccgctggcggcgcacgggaaggtgcg
agcacgattacgatgcaggtggcgcggaattttttcctgtccggagagaaaacgctgaca
cgcaaatttagcgaagtactcctggcactgaaaattgaacattatttgtccaaggatcag
attctcgaactgtacgtcaaccagatttatctgggacagcgtgcttacggtttctccgcc
gctgcccagacttactttgggcgcccgcttgaaagattgaccgtggcagaggcagcgatg
ctggctggactcccgaaagcgccctcgcgctacaatcctgtggtgaacccgaagcgggca
aaaattcggcagcattatgtcctgcgccgtatgcatgatctcaaatacattactgatgcg
gaatatcaggccgctctggcacaacctctggcggtaaagcgtgaggtgcataatgtagag
gtcaatgcggattatgtggcggaaatggtcaggcaggcgatgttcgagcgctatcaggag
gcgatttacagcagcggcatgaaagtttacaccacgctgcgtaaggttgatcaagaggct
gccaatcaggcgttgcgtcagggcgtgctggattatgatcgccgccatggctaccgtggg
ccggagagttttgttgatctgcctgttagggcggcaaatcttgaagaactgttggaagac
gctttggcggatgcggatacaagtaatggcctggtgcccgcgatcgttctggaggcgagt
ctgaagcaggtaaaatgctatattaagggcggcgaaactgtccagattagcaacgaaggt
ctgaagttcgtacttaaaaccctgagtgataatgccagcccgaaaactcgactgcgccga
ggtgcgctgattcgcgtccagaaggatgacaagtcagggtggcagattttacaacggccg
caaatcgagtcggcgctggtctcggtagtgcctcaggacggtgcgattcgtgctctggtc
ggagggttcgattttaatcgcagcaaattcaaccacgtcatgcaggcatggcgtcagccg
ggttcgagcttcaagccgttcatttactcggcggcgctggaaaaaggcttgactgccgca
accgtgatcaatgatgcccccatcgttgtggatgctgcccaaaccgggggccaggtctgg
gagccaaaaaattacgagaatgattatgatggcccgatgcgtttgcgcaccgccctgacc
aagtcgaagaacctggtttctatccgtgtgctgcagtctatcggcccatcgtacgcacag
gattacatcacccgtttcggcttctcgcctgagcagcaccccccctacctgactatggca
ctgggtgcgggatcggtaactcctatgcaaatggccgcggcttactcggtgtttgctaac
gggggctaccgtacgcagccttatttgatagaccggattgtcgatgcacgcggcaccctg
ctggtgcaggccaaacccaagcgtgcgggcgatgacgccgagcgtgtgatcgatgcacgg
aatgcttttatcatgacttccatcatgcgcgatgtggtccgttttggtaccggggcgcgc
gccatgcaactgaagcgccaggatctcgccggaaagaccggaactactaatgaccaggtg
gatgcctggtttacaggtttcaacccgggactggtggcgattgcctggattggctttgat
cagcctcgttccatgggcggatcagaaacgggcgctcaggctgcgctgccgatctggatg
ggttatatgggcaaggtgttgaaaggtgtgccggaagtagatctggtcattccggaaggt
gtagcgacagtcaagatcaacccgcaaagtggacatcgtgttcccgatggaagtgagggg
attctagaatatttttatcaggaaaatgttccggccgaacagaccggatttttcgaaggc
ctctttggcggtggcggaaaatccgcagaagaggttaaggatcaattgttctga
DBGET
integrated database retrieval system
