KEGG   Sulfuricella denitrificans: SCD_n03062
Entry
SCD_n03062        CDS       T02857                                 
Name
(GenBank) transcription regulator with HTH domain
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
sdr  Sulfuricella denitrificans
Brite
KEGG Orthology (KO) [BR:sdr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sdr03000]
    SCD_n03062
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sdr02048]
    SCD_n03062
Transcription factors [BR:sdr03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    SCD_n03062
Prokaryotic defense system [BR:sdr02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    SCD_n03062
SSDB
Motif
Pfam: HTH_3 MshEN
Other DBs
NCBI-ProteinID: BAN36861
UniProt: S6AKD2
LinkDB
Position
pSCD:27467..27844
AA seq 125 aa
MNIKPIHSEADYQGTLTEIEALWDAGDGSEAAEKLEVLSLLIETYEKKHFPIEAPDPVDF
LQYIMETRGLTRKDMEPYIGPRGRVSDILNRVRPMSLEMIRRLSVGLGLPATVLIQDYPL
KQEVA
NT seq 378 nt   +upstreamnt  +downstreamnt
atgaacattaaaccgattcactccgaagctgattatcagggcacgctaactgagattgag
gcattgtgggacgcaggcgacggcagcgaggctgcagagaagttggaggtgctgtctttg
ctcatcgagacttatgagaaaaagcacttcccaatagaggctcccgatcctgtcgatttt
ctgcagtacatcatggagacgcgcggcctgacccgcaaggatatggaaccttacatcggg
ccgcgtggccgggtatcggatattctgaaccgagtacggccaatgtccctggagatgatt
cgtcgtttgtctgtgggtttaggattgccagcgactgtgctgattcaggattacccattg
aaacaggaagttgcttaa

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