Streptomyces drozdowiczii: NEH16_02645
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Entry
NEH16_02645 CDS
T09042
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sdrz
Streptomyces drozdowiczii
Brite
KEGG Orthology (KO) [BR:
sdrz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdrz03021
]
NEH16_02645
Transcription machinery [BR:
sdrz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NEH16_02645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
MarR_2
KORA
DUF7343
GerE
HTH_37
Sigma70_ECF
MarR
HTH_3
HTH_27
HTH_31
Motif
Other DBs
NCBI-ProteinID:
UZK53170
LinkDB
All DBs
Position
579229..580131
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AA seq
300 aa
AA seq
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MATTTEQTDGVLGDVCTLTGQDGAPLGAGTAELPWIEDTGKVAPKDARALSKMFLDQLQT
LEEGTREYQYARNTLIEMNLSLVRYAASRFRNRGGDDTEDIIQVGTIGLIKAIDRFDLSR
EVEFATFAVPYIVGEIKRFFRDTTWAVHVPRRLQELRVDLAKAKEALSARLDRDPTVAEL
AAHLDLSEEEIIEGLVAANGYSAGSIDTPTAETDSGNEQRSLADVIGEADPGMETVENLH
TLAPLLEQLDERERRIVQMRFGEEMTQAQIGAELGVSQMHVSRLLARIVKRLRAGMSVEA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacgacggagcagaccgacggagttctcggcgacgtgtgcacgctcaccgga
caggacggcgcgcccctcggtgcggggactgcggagctgccgtggatcgaggacaccgga
aaggtcgcccccaaggacgcccgggccctttcgaagatgttcctggaccagctgcagacg
ctggaggagggcacgcgcgagtaccagtacgcgcgcaacaccctcatcgagatgaatctc
tcgctggtgcggtacgccgcctcgcggttccgcaaccgcggcggtgacgacaccgaggac
atcatccaggtcggcaccatcggcctgatcaaggcgatcgaccgtttcgacctctcgcgc
gaagtggagttcgccacattcgccgtcccctacatcgtcggcgagatcaagcgcttcttc
cgggacaccacctgggcggtgcacgtgccgcgccggctccaggagctgcgggtcgatctc
gcgaaggcgaaggaggccctgtccgcgcggctggaccgcgatccgacggtcgccgagctg
gccgcccacctcgatctctccgaggaggagatcatcgagggcctggtcgcggccaacggg
tactcggccggttcgatcgacacccccaccgcggagacggactccggcaacgagcagcgc
tcgctcgccgatgtgatcggtgaggccgaccccggcatggagaccgtcgagaacctgcac
accctggcgcccctgctggagcagctggacgagcgcgagcgccggatcgtccagatgcgg
ttcggcgaggagatgacgcaggcccagatcggcgcggagctgggggtctcgcagatgcac
gtctcccggctgctcgcccgtatcgtcaagcggctgcgggccgggatgtccgtggaagcc
tga
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