Streptomyces drozdowiczii: NEH16_02910
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Entry
NEH16_02910 CDS
T09042
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sdrz
Streptomyces drozdowiczii
Pathway
sdrz00040
Pentose and glucuronate interconversions
sdrz01100
Metabolic pathways
sdrz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sdrz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
NEH16_02910
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NEH16_02910
Enzymes [BR:
sdrz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
NEH16_02910
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
WxL
Motif
Other DBs
NCBI-ProteinID:
UZK53214
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Position
complement(639505..641064)
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AA seq
519 aa
AA seq
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MRRPVALRLSAALSTMALAAAAGAVLTMPEASAAVAGGATGYASQNGGTTGGAGGQTVRA
TTGTQIHQALCGRASSSTPITIEVEGTINHANTAKVSGDSCNTAAGVIELKQISNVTIVG
VGSGAVFDQLGIHIRQSSNIIIQNVTVKNVKKSGSPTSNGGDAIGMESDVRNVWVDHATL
EASGGEDDGFDGLFDMKDNTQYVTLSYSTLRNSGRGGLIGSSETQLDNGYVTFHHNLYEN
VDSRTPLLRGGTAHIYNNYYVKLNKSGINSRAGAHAKVDNNYFKDSKDVLGTFYTDTTGY
WQVSGNTFDNVTWSEPGEENHPAGPNPQSNTTVSIPYAYTLDASSCVPAIVTGTAGANKG
LKVSDGNCSTTNPTDPTDPTDPTDPTDPTDPTDPTTPTGTNLSLGAGADGSSKASGTSYG
NVRDGDLNTYWSPAGSTGSVSVKWGSATTVSAVTIREAAGAQGVTGSWRLLNADTGAVLK
TGSGAGTITVPATSLRKITFEITSAGGTPRIAEFETYAE
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgaccagtcgcactgagactttctgcggcgctgtccacgatggccctggcggcc
gcggccggagcggtgctcacgatgcccgaggcatccgccgccgtcgcgggcggcgccacc
ggctacgcgagccagaacggcggcaccaccggcggcgcgggcgggcagaccgtacgggcc
accaccgggacccagatccaccaggccctgtgcggccgggccagcagcagcacgccgatc
accatcgaggtcgagggcaccatcaaccacgccaacaccgccaaggtgtccggcgacagc
tgcaacacggcggccggtgtcatcgagctcaagcagatcagcaacgtcaccatcgtcggc
gtcggcagcggggccgtcttcgatcaactgggcatccacatacgccagtccagcaacatc
atcatccagaacgtgaccgtcaagaacgtcaagaagtccggctcgcccacctccaacggc
ggcgacgccatcggcatggagagcgacgtccgcaacgtctgggtcgaccacgcgaccctg
gaggcgtccggcggcgaggacgacggcttcgacggcctcttcgacatgaaggacaacacc
cagtacgtgacgctgtcctacagcaccctgcgcaactccggccggggcggcctcatcggg
tccagcgagacccagctcgacaacggctacgtcacgttccaccacaacctgtacgagaac
gtcgactcccgcacaccgctgctgcgcggcgggaccgcccacatctacaacaactactac
gtgaagctgaacaagtccgggatcaactcccgggccggcgcccacgccaaggtggacaac
aactacttcaaggactccaaggacgtcctcggcaccttctacaccgacaccaccggatac
tggcaggtcagcggcaacaccttcgacaacgtcacctggtccgagcccggcgaggagaac
caccccgccggaccgaacccgcagtccaacaccacggtgagcatcccctacgcctacacc
ctcgacgcctcctcctgcgtgcccgccatcgtgaccggcaccgcgggtgccaacaagggc
ctcaaggtctccgacggcaactgctccacgacgaaccccaccgacccgacggatccgacg
gaccccaccgacccgaccgatcccacggacccgaccgacccgaccacacctaccggcacc
aacctcagcctcggcgcaggcgccgacggctccagcaaggcgagcggaaccagctacggc
aacgtgcgcgacggtgacctgaacacctactggtccccggccggctcgaccggctccgtc
tccgtcaagtggggctccgccaccacggtctccgccgtcaccatccgcgaggccgcgggc
gcccagggggtgaccggctcctggcggctgctgaacgccgacaccggcgcggtcctcaag
accggcagcggcgccggcacgatcaccgtcccggccacctcgctgcgcaagatcaccttc
gagatcacctcggccggtggcacaccgaggatcgccgagttcgagacgtacgcggaatag
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