Streptomyces drozdowiczii: NEH16_05330
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Entry
NEH16_05330 CDS
T09042
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sdrz
Streptomyces drozdowiczii
Pathway
sdrz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NEH16_05330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdrz03000
]
NEH16_05330
03400 DNA repair and recombination proteins [BR:
sdrz03400
]
NEH16_05330
Enzymes [BR:
sdrz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NEH16_05330
Transcription factors [BR:
sdrz03000
]
Prokaryotic type
Helix-turn-helix
AraC family
NEH16_05330
DNA repair and recombination proteins [BR:
sdrz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NEH16_05330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HHH
RecR_HhH
HHH_5
UBA_6
HHH_8
DUF6233
Motif
Other DBs
NCBI-ProteinID:
UZK58398
LinkDB
All DBs
Position
complement(1191154..1192581)
Genome browser
AA seq
475 aa
AA seq
DB search
MDEETRYEAVSSRDARFDGEFFFAVETTGIYCRPSCPAVTPKRKNVRFYPTAAAAQTHGF
RACRRCRPDAVPGSAEWNVRADVVGRAMRMIGDGVVDREGVPGLAHRLGYSSRQVQRQLN
AELGAGPVALARAQRAHTARILLQTTALPVTEIAFAAGFGSLRQFNDTVRQIYARTPSAL
RAEAGTGLGIAVRQAGTTGIPLRLAHRGPYAAGDVFDLLAAGTVARVEEITGEPGRRTYR
RTLRLPYGTAVTSVDERSAGNWLDARIHLTDLRDLTTAVQRLRRLLDLDADPYAVDELLS
DDPALAPDVAARPGVRSPGSADAEEFAVRALVGDAAAGELVETYGKALDVPCGALTHVFP
EPAVLADAAGDPDLRALATALADGTVRLDAGADRDEAEQALCRLPGIGPTTAALIRMRGL
GDPDVDPYGTPGASGWRPWRSYGVRRARRAAQPQISAASQAPVTSRHAKSSTSTE
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagagaccaggtacgaggcggtgagcagccgcgacgcccgtttcgacggcgag
ttcttcttcgccgtcgagacgaccggcatctactgccggccgagctgccccgccgtcacc
cccaagcggaagaacgtccgcttctaccccacggcggcggccgcccagacccacggtttc
cgggcgtgccgccgctgccgcccggacgccgtccccggctcagccgagtggaacgtccgg
gccgacgtcgtcgggcgcgccatgcgcatgatcggcgacggcgtggtggaccgggagggc
gtccccggcctcgcccaccggctcggctacagctcacgccaggtgcagcgccagctcaac
gcggaactgggcgccggacccgtcgccctggcccgcgcccagcgcgcccacaccgcccgg
atcctgctccagaccaccgccctgccggtcaccgagatcgccttcgcggccggattcggc
agcctgcgccagttcaacgacaccgtccggcagatctacgcccgcaccccgagcgccctg
cgcgccgaggccggtacggggctgggcatcgcggtccgccaggccggcaccacgggcatc
ccgctccggctcgcccaccgggggccgtacgccgccggtgacgtcttcgacctgctcgcc
gccggaacggtcgcccgcgtcgaggagatcacgggggagcccggccgccgcacctaccgg
cgcacgctgcgcctcccgtacggcaccgccgtcacctccgtggacgagcggtccgccggg
aactggctggacgcccgcatccacctcaccgacctgcgcgacctgaccacggccgtccag
cggttgcgccggctcctcgacctggacgccgacccgtacgccgtggacgagctgctgtcc
gacgaccccgcgctcgccccggacgtcgcggcccggccgggcgtgcgctcgccgggctcg
gccgacgccgaggagttcgccgtgcgggcgctggtgggcgacgcggcggcgggggagctg
gtcgagacgtacggcaaggcgctggacgtgccgtgcggggcgctgacccacgtcttcccc
gagccggccgtgctcgccgacgcggccggtgacccggacctgcgggccctggcgaccgcg
ctcgccgacggcaccgtacgcctggacgcgggtgccgaccgcgacgaggccgagcaggcg
ctttgccggctgcccggcatcggcccgaccaccgccgcgctgatccggatgcgcggcctg
ggcgacccggacgtggacccgtacggcaccccgggcgcgagcggctggcgcccctggcgc
tcgtacggggtacggcgggcgcggcgcgcggctcagccccagatcagcgcggccagccag
gcgcccgtcaccagcaggcacgcgaagagctccacgagcaccgagtag
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