Streptomyces drozdowiczii: NEH16_07990
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Entry
NEH16_07990 CDS
T09042
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sdrz
Streptomyces drozdowiczii
Brite
KEGG Orthology (KO) [BR:
sdrz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdrz03009
]
NEH16_07990 (rimO)
Enzymes [BR:
sdrz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NEH16_07990 (rimO)
Ribosome biogenesis [BR:
sdrz03009
]
Prokaryotic type
ribosomal protein modification factors
NEH16_07990 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
UZK54102
LinkDB
All DBs
Position
complement(1803419..1804897)
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AA seq
492 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWELVEDASDADVAVVNTCGFVEAAKKDS
VDALLEANDLKDHGRTQAVVAVGCMAERYGKDLAEALPEADGVLGFDDYADISDRLQTIL
SGGIHASHTPRDRRKLLPISPAERQDAAVSLPGHAQEIAPAPADLPEGVAPVSGPRAPLR
RRLGTSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLGETRWLAEQGVKEVMLVS
ENNTSYGKDLGDIRLLETLLPELADVDGIERIRVSYLQPAEMRPGLIDVLTSTPKVAPYF
DLSFQHSAPGVLRAMRRFGDTDRFLELLDTIRGKAPQAGARSNFIVGFPGETEDDLAELE
RFLTGARLDAIGVFGYSDEDGTEAVGYDNKLDADVIAERLAHISQLAEELTSQRAEERMG
ETLQVLVESVEPTDDEPRAFGRAAHQAPETDGQVLFTTREGLVPGRMVEAKVVGTEGVDL
IAECSELVEVAR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcctggcagcggacggctgggagctcgtcgaggatgcctcc
gatgccgacgtcgccgtcgtcaacacctgtgggttcgtggaggccgccaagaaggactcc
gtcgacgccctcctcgaagccaatgatctgaaggaccacggccgcacccaggccgtcgtc
gccgtcggctgcatggccgagcgctacggcaaggacctcgccgaggccctgccggaagcg
gacggtgtcctcggcttcgacgactacgccgacatctccgaccgcctccagaccatcctc
agcggcggcatccacgcctcccacaccccccgcgaccgccgcaagctgctgccgatcagc
cccgccgagcggcaggacgccgccgtgtccctgcccggtcacgcgcaggagatcgcccct
gcccccgccgacctgccggagggcgtagccccggtctccgggccgcgcgcgcccctgcgc
cgccggctgggcaccagccccgtcgcctcggtcaagctggcctccggctgcgaccggcgc
tgctccttctgcgccatcccgtccttccgcggctccttcatctcccgccgtccctcggac
gtgctgggcgagacccgctggctcgccgagcagggcgtgaaggaggtcatgctcgtctcc
gagaacaacacctcgtacggcaaggacctcggcgacatccgcctcctggagaccctgctg
cccgagctggcggacgtcgacgggatcgagcgcatccgcgtcagctacctccagcccgcc
gagatgcggcccggcctgatcgacgtcctcacctcgacaccgaaggtcgcgccctacttc
gacctgtccttccagcactccgcgcccggcgtgctgcgggcgatgcgccgcttcggcgac
accgaccgcttcctggagctgctggacacgatccggggcaaggcgccgcaggccggtgcc
cggtccaacttcatcgtcggcttccccggcgagaccgaggacgacctcgcggagctggaa
cggttcctcacgggcgcccgtctcgacgccatcggcgtcttcggctactccgacgaggac
ggcaccgaggcggtcggctacgacaacaagctcgacgccgacgtcatcgcggagcgcctc
gcgcacatctcgcagctcgctgaggaactgacctcgcagcgcgccgaggagcgcatgggc
gagacgctccaggtgctggtcgagtccgtcgagcccaccgacgacgagccgcgcgccttc
gggcgcgccgcgcaccaggcgcccgaaacggatggccaggtgctcttcaccacacgcgag
ggcctggtcccgggccgtatggtcgaggcaaaggtcgtgggcaccgaaggcgtggacctg
atcgccgagtgcagtgagcttgtggaggtagccagatga
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